Rahnella aquatilis HX2: Q7S_03835
Help
Entry
Q7S_03835 CDS
T01850
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa00300
Lysine biosynthesis
raa00470
D-Amino acid metabolism
raa01100
Metabolic pathways
raa01110
Biosynthesis of secondary metabolites
raa01120
Microbial metabolism in diverse environments
raa01230
Biosynthesis of amino acids
Module
raa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Q7S_03835
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q7S_03835
Enzymes [BR:
raa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Q7S_03835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AFE57025
LinkDB
All DBs
Position
838185..839444
Genome browser
AA seq
419 aa
AA seq
DB search
MPRALNDMSTALNAANLLALPQQFGCPVWAYDAEIIKQRIAQLRQFDVIRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALVAGFIPGGTDSEIVFTADVLDQPTLERVTALDIPVN
AGSIDMLSQIGQHKAGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPQALTEIAR
YGLKLVGIHMHIGSGVDYGHLEQVCDAMVRQVIETGHDIEAISAGGGLSIPYHFEEESID
TGHYFGLWNRAREQIAAHLGHEIKLEIEPGRFLVAESGVLVAQIRAVKNMGSRHFVLCDA
GFNDLMRPAMYGSYHHISLLPADGRDVSGQPLTDSVIAGPLCESGDVFTQQAGGGVETFP
LPPVHIGDYLVFHDTGAYGASMSSNYNTRPLLPEVLFENGVPRLIRRRQTVEELIALEL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgctctgaacgatatgtctaccgcgcttaatgccgcgaatttactggctctg
ccgcaacaatttggctgccctgtgtgggcgtatgacgctgagattatcaaacagcgcatc
gcgcagttgcgccagtttgacgtgatccgttttgcgcagaaagcctgttctaatattcat
atcctgcgtctgatgcgcgagcagggcgtgaaggtcgattccgtttctttgggtgaaatt
gagcgtgcgctggtggccggttttattccgggcggcacagacagtgagattgtgtttact
gctgacgtactggatcaaccgacgctggagcgcgtgacagcgctggatattccggtgaac
gccggttccatcgacatgctcagccagattggccagcacaaagccggacatccggtgtgg
ctgcgcgtgaacccgggctttggtcacgggcacagccagaaaaccaatactggcggggaa
aacagcaaacacgggatctggtatgccgatttaccgcaggcgctgacagagattgcccgt
tacggcctgaaactggtgggcattcatatgcatatcggttccggcgtggattatggtcac
cttgagcaggtttgcgatgcgatggtgcgccaggtgattgaaacaggacacgatattgaa
gcgatctccgccggtggcggcctgtcgatcccctatcattttgaagaagaatccattgat
accggccactattttggtctgtggaatcgtgcgcgcgagcagattgccgcgcatctcggg
catgagattaaactggagatcgaaccggggcgtttcctggtggcggaatccggcgtgctg
gtggcgcaaatccgtgcggtgaaaaacatgggcagccgtcatttcgtgctgtgcgacgca
ggctttaatgacctgatgcgcccggcgatgtacggcagctatcatcatatttcactgtta
ccggccgatggccgcgatgtgagcggacaaccgctgacggattccgtgatcgccggtccg
ctgtgtgaatccggcgacgtgtttacccagcaggcaggcggcggagtggaaaccttcccg
ctgccgccggtacacatcggcgattatctggtgttccacgataccggcgcgtacggcgca
tcgatgtcatcaaactacaacacccgacctctgctgccggaagtattgtttgagaatggc
gtgccaagactgattcgtcgcaggcagacggtggaagagttaattgctctggagctctag
DBGET
integrated database retrieval system