KEGG   Rahnella aquatilis HX2: Q7S_09420
Entry
Q7S_09420         CDS       T01850                                 
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
raa  Rahnella aquatilis HX2
Brite
KEGG Orthology (KO) [BR:raa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:raa03400]
    Q7S_09420
Enzymes [BR:raa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Q7S_09420
    5.6.2.6  RNA 3'-5' helicase
     Q7S_09420
DNA repair and recombination proteins [BR:raa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Q7S_09420
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AFE58120
LinkDB
Position
complement(2051482..2053680)
AA seq 732 aa
MSSAYDSLDPRVRKWVYKQGWSALRPLQESAIPAILARDRDVLISASTAAGKTEAFFLPA
CSAIAGITTGFGIVYISPLKALINDQYRRLESLGEALEMPVTPWHGDVPQSKKKKIRTDP
AGILLITPESLESLLINSSGWIKQAFSPVAYIVIDEFHAFIGTERGMQLLSLLNRIDHML
GRHVNPVPRVALSATLGELDKVPELLRPDKRLPCETVTDNNSTTTLQVQVKGYLVPVTEK
GEEPQNSAEQHVCADIFRLCRGDSHLVFANSRKRTESIAAALSDMCEENVVPNEFFPHHG
SLSRELRETLEARLQQGNLPTTAVCTMTLELGIDIGKVQSVVQVTPPHSVSSLRQRMGRS
GRRDSPSVLRMLISEQELTATSSIVDCLRLQLVQSMAMIRLMITKRWFEPADARQMHYST
LLHQILAFTAQWGGVRADQLWSQLCQTGPFRNIDLADFKSLLRHMGAYGLLTQLASGEMV
IGAEGEKLTSHYTFYAVFNTPEEFRIVTGSRTLGTLPVDSPLLPDQHIIFGGRRWKVTEI
EVEKKVIYVEATKGGQPPHFSGGGMSVHDVVRQEMLAIYRENDYRIAIGSKRVDYADATA
RSLFAEGGDNFKRYNLQNSHFISDGQRSYVLPWMGDKVVNTITALLMRSSFKASSFAGVI
ETEGASVSSVQRALKEILLSGLPSESELAADVPEKNLDKYDDYLPESLLAKGYGAKAYDI
EGTKFWLQKNIL
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagcagcgcgtacgatagtctcgatccccgcgttcgtaagtgggtttataaacagggc
tggtctgcattaagacccctgcaagagagcgctatccctgcaattttagcccgtgaccgg
gacgtgctaattagtgcaagcacagcagcgggtaaaacagaggctttctttctgcctgcc
tgttcagcaattgcaggtatcactaccgggtttggtattgtttatatcagcccgcttaag
gcgctcattaacgaccagtaccgtcgtcttgagagccttggcgaggcgttggaaatgcct
gtgacgccttggcacggtgatgtaccgcaaagcaaaaagaagaagatacggactgacccg
gcgggcatcctacttatcacgccagaatcacttgagtctttactcataaattcatcgggc
tggattaaacaggcattttcgccagtagcctacattgttattgatgagtttcacgccttt
attggtaccgagcgcggcatgcagttgctctccctgctcaacagaattgatcatatgctg
gggcgtcatgttaatccggttccccgcgttgcgttaagcgctacgttaggagaactggat
aaagtgcctgaactgttgcgtccggataagcgattgccctgcgaaactgtgacagacaat
aatagcacgaccacactgcaagtgcaggtcaaaggctatctggtgccggtgaccgaaaaa
ggagaagagccacaaaactcagcagaacaacacgtctgcgctgacattttcagactctgc
cggggcgactcccatttagtctttgcaaacagtcgaaagcgcactgaaagcatcgcggcg
gcgctaagcgacatgtgtgaagaaaatgttgttccgaatgaattctttccacatcacgga
tccctgtccagggaattacgcgagacacttgaagcccgtctacagcagggtaatttgcct
acaacagctgtctgtaccatgacgcttgagctgggtattgatatcggtaaggtgcagtcg
gttgtacaggttactcctccacattccgtctccagcctgcgtcagcgtatgggccggtca
ggacggcgagattctccatcggttctgagaatgctaatctctgaacaagaacttaccgca
accagcagcatcgtagactgcttgcggctacaactggttcagtcgatggcgatgattcga
ttgatgatcactaagcgatggttcgaaccggctgatgcccgccagatgcactactccacg
ctgctgcaccagattctggcgttcaccgcgcaatggggtggagttcgagccgatcaactt
tggtcacaactgtgccagactggcccgttccggaacatcgatttagctgatttcaaaagt
ctgcttcggcatatgggtgcatacggactgctgacacaacttgctagcggagaaatggtt
attggggctgagggggagaagctgactagccattatacgttttacgccgtgttcaatact
ccagaagaattccgcattgtcacaggaagccgaacccttggcacattgccagtagattcc
cctcttctacctgaccaacacataatcttcggtggacggcgctggaaagtgacagagatc
gaggtggaaaaaaaagttatctatgttgaggcgaccaaaggcggccagccgccacacttt
agtggtggaggtatgtctgttcatgacgttgttcgccaagagatgctcgctatctacagg
gaaaatgattatcgcatcgcaataggaagtaagagggtcgattatgcggatgccaccgcc
agaagcctttttgcagaaggcggtgacaactttaaacgttacaatctgcaaaactcccat
tttatttccgatggacagcgtagttatgttctcccctggatgggtgataaagtcgttaat
acaataacggccttgctaatgcgtagcagcttcaaagccagttcatttgccggtgttata
gagacagagggcgcaagtgtatcctctgtccaacgcgcgctaaaagaaatactgctgtcg
ggcttgccttcagaatcagagctcgctgcggatgttccagaaaaaaatctggataaatat
gacgattatctgccggagtccctacttgcgaaagggtatggagcaaaggcgtatgacata
gaaggcacaaagttctggctacagaaaaatattctctag

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