Rahnella aquatilis HX2: Q7S_09820
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Entry
Q7S_09820 CDS
T01850
Symbol
rcsA
Name
(GenBank) colanic acid capsular biosynthesis activation protein A
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
raa
Rahnella aquatilis HX2
Pathway
raa02020
Two-component system
raa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q7S_09820 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q7S_09820 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
raa03000
]
Q7S_09820 (rcsA)
Transcription factors [BR:
raa03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
Q7S_09820 (rcsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Motif
Other DBs
NCBI-ProteinID:
AFE58198
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All DBs
Position
complement(2150334..2150948)
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AA seq
204 aa
AA seq
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MQTIILDPCRYTRLGLQQFLASEQDISYVSHFEQLLNGCSKLNPSLVFINEDCISPHSGN
KERLGELITEYPDTLFFIFMSRTRIHFEEYIFVRKNVIITSKSIKADTLKQLINHPLLPQ
SQDPASSGMLDTRPVMLSRSESAMLKMWMSGNGTIEISDKLQIKTKTVSSYKGNIKRKIK
SPNKHIIYHVVRLCDQLTNGIYVN
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgataatcttggatccatgccggtatacgcgtctcggattgcaacaatttctc
gccagtgaacaagacatcagttacgtcagccattttgagcagcttctgaatggttgcagc
aaactgaatccttcccttgtttttattaacgaggattgcatatcgcctcattcaggtaat
aaagagcgtctgggagaactgatcaccgaataccctgatacgctgttttttatttttatg
tcccgtacgcgtattcattttgaagagtatatttttgtgcgtaagaacgtgattatcacg
tcgaaatccattaaggccgatacccttaagcagttaatcaatcatccgttattgccgcag
tcgcaggatcctgccagcagcggaatgctcgatacccggcccgtgatgctcagccgttct
gaatcagcgatgctcaagatgtggatgtccggcaacggtaccattgaaatatccgataaa
ttacaaattaaaaccaaaacggtgtcttcctataagggaaatattaaaaggaaaataaaa
tcaccgaataaacatattatttatcacgtcgtccgtttatgtgatcagcttaccaacggc
atctacgtcaattaa
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