Rahnella aquatilis HX2: Q7S_11350
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Entry
Q7S_11350 CDS
T01850
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
raa
Rahnella aquatilis HX2
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
raa03016
]
Q7S_11350
Enzymes [BR:
raa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Q7S_11350
Transfer RNA biogenesis [BR:
raa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Q7S_11350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AFE58500
LinkDB
All DBs
Position
2509844..2511787
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGIVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRV
IASLQTEKEREVVQPETLVEPFLSRFVGRVTKKDDRLSIIPDHPLLRDAIQCRVARSINH
EVNDGDWCVAEMRRHPLKEGDHSFQAEITEWITTGADDLAPWWVTLARHNLEREAPKSDI
AELRDEGLTREDLTALPFVTIDSGSTQDMDDALYVKDNSDGTLQMTVAIADPTAYVSEGS
ELDNIAKKRAFTNYLPGFNIPMLPRELSDDICSLWPDVSRPVLACSVTVGADGTLGSDIR
FFAATIESKAKLAYDDVSDWLEADEKSEWQPASEVIASQIRLLKRVCDVRSAWRTEHALV
FKDRPDYRFVLGEKGNVLEIIAEHRRIANRIVEESMIAANVCAAIALRDSLGFGVYNVHT
GFDPLLVENAVTVLQANDVEANAEELLTLPGFCALRRKLDALPTQFLDSRIRRFQTFAEI
STTPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAMILQQSAEKPQDDMTIQLAERRRA
NRMAERDVGDWLYARYLEDKVGTDVKFSAEIIDVTRGGLRIRLQDIGAVAFIPAPFLHSV
RDELVCSADTGTVLIKGEVAYRQSDIIEVNIAEVRMENRNVIAKPAV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctcgcgcagctaaaacagcaacttcactctcagactccg
cgtgtcgaaggcatcgtaaaaggcactgagaaaggctttggctttcttgaagtagacggt
caaaaaagctatttcattccgcctccgtacatgaaaaaagtcatgcacggggatcgcgtt
atcgcttccctgcaaaccgaaaaagagcgtgaagtcgtccagccggaaacattggttgaa
ccttttctcagccgttttgttggccgcgtaacgaagaaagacgaccgtctttctatcatt
ccggatcatcctttattacgtgatgctattcagtgccgcgttgcccgcagcatcaatcat
gaagtgaatgacggcgactggtgtgtggctgaaatgcgccgtcacccgctgaaagaaggc
gaccacagcttccaggctgaaatcaccgaatggatcaccaccggcgccgacgatcttgcg
ccgtggtgggtcacgctggcacgtcataaccttgaacgtgaagcgccgaaatctgacatt
gccgagctacgcgatgaaggcctgacccgcgaagacctgaccgccctgccatttgtcact
atcgacagcggcagtacgcaggacatggatgacgcgctgtatgtgaaagacaacagcgac
ggcaccctgcaaatgactgtcgcaattgctgacccgacggcttacgtcagcgaaggcagc
gagctggacaacattgcgaaaaaacgcgcattcaccaactatctgccgggcttcaacatc
ccgatgctaccgcgtgaattgtccgatgatatctgttccctgtggccggacgtcagccgt
ccggttctggcgtgttctgtcacggtaggcgcagatggcacactgggcagcgacattcgt
ttcttcgcggcgactatcgagtcgaaagccaaactggcttatgacgacgtgtctgactgg
ctggaagcggatgagaaaagcgaatggcaaccggccagtgaggtgatcgcctcacagatc
cgcctgctcaaacgcgtctgcgacgtgcgcagcgcatggcgtaccgaacatgcactggta
tttaaagaccgtcctgattaccgcttcgtgctgggtgagaaaggtaacgtgctggaaatc
atcgccgagcatcgccgcattgctaaccgcatcgttgaagaatcgatgattgccgccaac
gtctgtgccgctatcgccctgcgcgacagcctcggtttcggcgtttataacgtgcatacc
ggttttgatcctctgctggtggaaaacgcggtcaccgtgctgcaggcgaatgacgttgaa
gccaacgctgaagaactgctgaccctgccgggcttctgcgctctgcgccgtaagcttgat
gcattgccaacccagttcctcgacagtcgcatccgtcgtttccagacctttgcagaaatc
agcaccactccggggccgcacttcggcctggggctggaagcttatgcgacctggacatca
cctatccgtaaatacggcgacatggtgaaccaccgtttgctgaaagcgatgatcctgcaa
cagtctgctgaaaaacctcaggacgacatgaccattcaactggcagaacgccgtcgtgcc
aaccgcatggccgagcgcgatgtcggtgactggttgtatgcccgttacctggaagataaa
gtcggcactgacgttaaattcagtgctgaaattatcgatgtcacccgcggcggcctgcgc
atacgtctgcaagatatcggtgccgtggcgttcatccctgctccgttcctgcacagcgtg
cgcgacgaactggtgtgcagcgccgataccggtactgtcctgattaaaggcgaagtggcc
taccgccagagcgacatcattgaggtgaacattgctgaagttcgcatggaaaaccgcaat
gtgatcgccaaaccggcagtctag
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