Rahnella aquatilis HX2: Q7S_12835
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Entry
Q7S_12835 CDS
T01850
Symbol
xylF
Name
(GenBank) D-xylose transporter subunit XylF
KO
K10543
D-xylose transport system substrate-binding protein
Organism
raa
Rahnella aquatilis HX2
Pathway
raa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q7S_12835 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
raa02000
]
Q7S_12835 (xylF)
Transporters [BR:
raa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
Q7S_12835 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AFE58790
LinkDB
All DBs
Position
complement(2838109..2839101)
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AA seq
330 aa
AA seq
DB search
MKMNKVILSACAALVLFSQSGLAKEIKIGMAIDDLRLERWQKDRDIFVAKAKTLGADVFV
QSANGNEETQMAQIENMINRGVDVLVIIPYNGEVLSNVIAEAKQEGIKVLAYDRMINNAD
IDFYISFDNEKVGELQAQSLVERVPQGNYFLMGGSPVDNNAKLFRAGQMKVLNPLIKDGK
IKVVGDQWADGWLPENALKIMENALTANNNKIDAVVASNDATAGGAVQALSAQGLAGKVA
ISGQDADLAAIKRIEAGTQTMTVYKPITKLANDAAEIAVQLGKGETPKSNATLNNGKKDV
PSYLLTPIPVDKNNIESTVVADGFHKKSDL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaataaagtaattctttctgcctgtgccgcattagtgctttttagccagtca
gggttagcgaaagaaattaaaattggtatggctattgatgacttacgtttagagcgctgg
caaaaagaccgtgatatttttgtggctaaagccaaaacgctgggtgcggatgtttttgtg
caatccgcaaacggcaatgaagaaacacaaatggcgcagattgaaaatatgatcaaccgt
ggcgtcgatgtgctggtcatcatcccgtataacggcgaagtgctcagcaacgtgatcgcc
gaagcgaagcaggaaggcatcaaggtgctggcctatgaccgcatgattaacaacgcggac
attgatttttatatctctttcgacaatgaaaaggtcggggagctgcaggcacaaagcctg
gttgagcgtgtgccgcaggggaattatttcctgatgggcggctcgccggtggataacaac
gccaagctgttccgcgcaggacaaatgaaagtgctgaacccgcttatcaaagacgggaag
attaaagttgtgggagatcagtgggccgatggctggttgccggaaaacgccctgaaaatt
atggaaaatgccctgacggccaacaacaacaaaattgatgccgtggtggcgtctaacgat
gcgacggccggtggtgcagtacaggctctgtcagcacaagggctggcagggaaagtagcg
atctcgggtcaggatgccgatctcgcggcgatcaaacgtatcgaagccggtactcaaacc
atgaccgtttataaaccgattaccaaactggccaatgacgctgccgaaatcgcggtgcag
ttaggcaaaggggaaaccccgaaatccaatgccacattaaataatggcaaaaaagacgtg
ccgtcttatttattaacaccgatcccggtggataaaaataatattgaaagcaccgtggtg
gccgacggattccacaaaaaatcagacctttaa
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