Rahnella aquatilis HX2: Q7S_12860
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Entry
Q7S_12860 CDS
T01850
Name
(GenBank) autoinducer 2-binding protein lsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
raa
Rahnella aquatilis HX2
Pathway
raa02010
ABC transporters
raa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q7S_12860
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q7S_12860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
raa02000
]
Q7S_12860
Transporters [BR:
raa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
Q7S_12860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
Gp80
DUF6848
Motif
Other DBs
NCBI-ProteinID:
AFE58795
LinkDB
All DBs
Position
complement(2843727..2844743)
Genome browser
AA seq
338 aa
AA seq
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MKANTMKILLIASAVSLACLSAQAAERIAFIPKLVGVGYFTSGGNGAMAAGKALGADVTY
DGPTEPSVSGQVQMINNFVNQGYNAIVVAAVSPDGLCPALKRAMQRGVKVLTWDSDTKPE
CRSIYINQGTPQQLGSMLVEMTSSQVKKEKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH
PGWEIVTTQYGYNDATKSLQTAEGILKSYGDLDAIIAPDANALPAAAQAAENLKRTNVTI
VGFSTPNVMRPYVERGTVKQFGLWDVVSQGKISVYVADQLLKKGALNVGDKLDVPDVGTV
EVVPNSVQGYQYEAKGNGIVLLPERVVFTKDNIGKYDF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaacacaatgaaaatcttgttaattgccagtgccgtgagcctcgcgtgtctg
agcgcacaggcggctgaacgtatcgcctttatcccaaaactggtgggcgtcggttatttc
accagcggcggcaacggcgcaatggccgccggtaaagcgctgggcgcggacgtgacctac
gacggtccgaccgagccgagcgtttccggtcaggtgcagatgatcaacaacttcgtcaat
cagggatacaacgcgattgtggtggcggcggtatcacccgacggcctgtgtccggcgctt
aaacgcgcgatgcaacgcggcgtgaaagtgctgacctgggattccgataccaaaccggaa
tgccgctcgatttacatcaatcagggcacaccacaacaactgggttcgatgctggttgag
atgacctccagccaggtgaaaaaagagaaagcgaaagtggcgttcttctattccagcccg
acagtgaccgaccagaatcagtgggtgaaagaggcgaaagccaaaatcgccaaagagcat
ccgggctgggaaatcgtgactacgcaatacggttataacgatgccactaaatccctgcaa
accgccgaagggatcctgaaatcttatggcgatctggatgcgattattgcccctgatgcc
aacgcattaccggcagcggctcaggcggcggaaaacctcaaacgtaccaacgtgaccatc
gtcggtttcagtacgccaaacgtcatgcgcccgtatgtcgaacgcggcacggtgaaacag
ttcggtctgtgggacgtggtcagccagggcaaaatttcggtttatgtcgccgatcagtta
ttgaaaaaaggcgcgcttaacgtgggtgacaaactggatgtgccggacgtcggaacggtg
gaagtggtgccgaacagcgtgcagggctaccagtatgaggccaaaggtaacggcatcgtt
ttactgccggaacgcgtggtcttcaccaaagacaacatcggcaaatacgacttctga
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