Rahnella aquatilis HX2: Q7S_12875
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Entry
Q7S_12875 CDS
T01850
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
raa
Rahnella aquatilis HX2
Pathway
raa02010
ABC transporters
raa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q7S_12875
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q7S_12875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
raa02000
]
Q7S_12875
Transporters [BR:
raa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
Q7S_12875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
KdpD
MukB
AAA_23
AAA_27
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFE58798
LinkDB
All DBs
Position
complement(2846852..2848414)
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AA seq
520 aa
AA seq
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MQSSKQLSADLQTTNLLLQVSGVSKSFSGVAVLKDIDFSLQGGEVHALLGGNGAGKSTLM
KIIAGVEIADSGTLLLGGEPLLAQSPAKAHQAGIYLVPQEPMLFPSLTVRENILFRLPAH
QAGEKKLQQTLADLGCNLPLGALAGTLEVADQQLVEILRGLMRDARLLILDEPTASLTPA
ESARLFTQVRHLTGQGVGVVFISHKLPEIRAIADRVSVMRDGKIALSGRLAELDNDALIR
AITPHSQDTALPAEQKLWLDLPGTRRNPAGSKPVLQVQNLTGEGFINISFSARAGEIVGL
AGVVGAGRTELAETLYGLRDARRGQVLLQQQDISGLTTLQRLKKGLVYLPEDRQASGLYL
DAPLSWNTTSLTFNRQGWWLNIKREAAVLERYHRALGIQYRDGSQTARTLSGGNQQKLLI
AKCLEAQPAVLIVDEPTRGVDVSARADIYQLLREVVQQNVAVILISSDLDEIEGLADRVF
VMHQGEMSGELQGSDINVSNIMHIAFGNHAKTPATGGTSC
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcaaacagttatcagcagacctgcaaaccacgaacctgctgttgcaggtc
agcggtgtcagtaaaagcttttccggcgtggcagtgctgaaagacatcgatttcagcctg
caaggcggagaagtccacgcgctgcttggcggcaatggagcgggtaaatcgacactgatg
aaaatcattgccggtgtcgaaatagccgacagtggcacgttactgctcggcggcgagcct
ttactggcgcagtcaccagcaaaagcgcatcaggcggggatttatctggtaccgcaggag
ccgatgctgtttcccagcctgaccgtgcgcgaaaacatcctgttccgcctgcctgcacat
caggccggcgaaaaaaaattgcagcaaacgctggctgatctggggtgcaatttaccgctg
ggtgcccttgccggaaccctggaagtggccgatcagcaactggtggaaatcctgcgcggg
ctgatgcgcgatgcgcggctgttgatccttgatgaaccaaccgcctcgctgacaccggcg
gaatccgcccgcctgtttacacaagtccgtcatctcaccgggcagggcgtcggggtggta
ttcatctcgcacaaactgccggaaatacgtgcgattgccgaccgggtcagtgtgatgcgt
gatggcaaaattgcgctcagcggcaggctcgccgaactggataacgatgcgctgatccgc
gccatcaccccgcattcccaggacaccgcgctgcccgcagaacaaaagttgtggctggat
ttacccggcacacgacgcaacccggcaggcagcaaaccggtcttgcaggtgcaaaacctg
accggtgagggctttattaatatttcattcagcgcccgcgccggggaaatcgtcgggctg
gcaggcgtggtgggggcagggcgcaccgaactggcagaaaccctgtatggcctgcgtgac
gcccgacgtggtcaggtgcttttgcagcaacaagacatcagcggcctgacgaccttacag
cggctgaaaaaagggctggtgtatttgccggaagaccggcaggcatccggcctgtatctc
gacgcgccgctgagctggaacaccacctcactcaccttcaaccgtcagggctggtggctg
aacatcaaacgcgaagcggcggtgctcgaacgctatcaccgtgcgctcggcattcaatac
cgcgacgggtcacaaactgcccgcacactttccggcggtaatcagcaaaaactgttgatc
gccaaatgccttgaggcacagcccgcggtgctgattgtcgatgaacctacgcgcggcgtg
gatgtgtccgcgcgtgctgacatttaccagttgctgcgcgaagtggtgcaacagaacgtg
gcggtgatcctgatttcatctgatctggatgaaattgaaggactggcggatcgggtattc
gttatgcatcagggggaaatgagcggcgaattgcagggcagcgacatcaacgtcagcaac
attatgcatatcgcatttggtaatcatgccaaaacccccgccaccggaggaacctcatgc
taa
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