Rahnella aquatilis HX2: Q7S_15960
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Entry
Q7S_15960 CDS
T01850
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
raa
Rahnella aquatilis HX2
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raa03400
]
Q7S_15960
Enzymes [BR:
raa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Q7S_15960
DNA repair and recombination proteins [BR:
raa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Q7S_15960
Prokaryotic type
Q7S_15960
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF1815
Motif
Other DBs
NCBI-ProteinID:
AFE59405
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All DBs
Position
complement(3484901..3486331)
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AA seq
476 aa
AA seq
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MTTHLVWFRNDLRITDNRALHAACEDPQARVIAVFVATPEQWKQHEMAPRQAMFIYQHLQ
ALQHALAERGIGLHYHQCDDFADSVTWLKDFCKTEKVDALFYNKQYEFNERQRDAALENA
VSESVICHAFDDSLLLPPGSVMTGNNEMYKVYTPFRRAFLSRLTESDSRSLPAPQTRGNA
EKVVTHRLMPFDYPLADIGDHFAIGEEAARNRLRSFCREQVQDYLEQRDLPAVDGTSSLS
PYLAIGVLSPRQCLNRLRAECPDVLEKTDGGAFGWLNELVWREFYRHLIVAWPKLCKHQP
FVAWTDNVRWRHAPDDLQAWKDGKTGYPIVDAAMRQLNATGWMHNRLRMIVASFLVKDLL
INWREGERYFMSQLLDGDLAANNGGWQWGASTGTDAAPYFRIFNPTTQGERFDKTGCFIK
AWVPELADVPERDIHQPHRWAEKHHRVLDYPLPVIDHAQARKDTLAAFEAAKNRSD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatttagtctggttccgtaatgacctgcggataaccgacaatcgcgcgttg
catgcggcctgtgaagacccacaggcgcgtgttattgccgtatttgttgccacgcccgaa
cagtggaaacaacatgaaatggcaccgcggcaggcgatgtttatttatcaacatcttcag
gcgttacagcatgcgctggctgagcgtggcatcggtctgcattaccaccagtgtgatgat
tttgccgacagcgtgacgtggctgaaagatttctgcaaaaccgaaaaagtggatgcgctg
ttttataacaaacagtatgagttcaacgagcgtcagcgtgatgcggcgctggagaacgcg
gtcagtgaatcggtcatctgccacgcttttgacgacagtctgctgctgccgccgggttcg
gtaatgaccggcaataatgaaatgtacaaggtttatacgccttttcgccgcgcgttttta
tcccgcctgaccgaatctgacagccgctcgctgcctgcgccacagacacgaggaaatgct
gaaaaagtggtgacacaccggctgatgccgttcgattatccgctggcggatatcggcgat
cattttgcgattggcgaggaagccgcgcgtaaccggctgcgcagtttttgtcgtgaacag
gtgcaggattacctcgaacaacgtgatttaccggcggtcgacggcaccagttcgctttcg
ccgtatctggccattggcgtgctttcgccgcgccagtgtctgaaccgcctgcgcgctgaa
tgcccggacgtgctggagaaaaccgacggcggcgcgttcggctggctgaacgagctggtg
tggcgcgagttttaccgccatctgatcgtcgcctggccgaaactttgcaaacatcagccg
ttcgttgcatggactgacaacgtgcgctggcgtcatgcgcccgatgatttgcaggcgtgg
aaagacgggaaaaccggttatccgattgtagatgcggctatgcgtcagctgaatgcgacg
ggctggatgcataaccgtctgcgtatgattgtcgccagttttctggtgaaggatttactg
atcaactggcgtgaaggcgaacgctatttcatgtcgcagcttctggatggtgatctggcg
gccaacaacggcggctggcagtggggtgcctcgacgggtactgacgccgcgccgtatttt
cgtattttcaatccgacgacacagggcgaacgttttgataaaaccggatgctttatcaaa
gcctgggtgcctgaactcgcggatgtgccggaaagagacattcatcaaccgcatcgctgg
gcggaaaaacatcatcgcgtgctagactacccgctgccggttattgatcacgcgcaggcg
agaaaagacacgctcgcggcgtttgaggcggcaaaaaaccggtcagactga
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