Rahnella aquatilis HX2: Q7S_18350
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Entry
Q7S_18350 CDS
T01850
Name
(GenBank) carbohydrate diacid transcriptional activator CdaR
KO
K02647
carbohydrate diacid regulator
Organism
raa
Rahnella aquatilis HX2
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
raa03000
]
Q7S_18350
Transcription factors [BR:
raa03000
]
Prokaryotic type
Helix-turn-helix
Other families
Q7S_18350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF_2
GAF
Motif
Other DBs
NCBI-ProteinID:
AFE59881
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Position
complement(4010785..4011945)
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AA seq
386 aa
AA seq
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MSAYHLDAKLAQQIVARTMQIIDSNVNVMDGRGRIIGSGDDQRLGELHEGALLAISQERI
VDIDEGVARHLHGVRPGINLPLRIDGQIVGVIGLTGNPSQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLIRVDELSPALMEWAQRLGIDLNRPRVAAVVEVDSGQLGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNSYDRWDPEGHRQRIDHLLSRMTE
TGRLRVRISLGNFFTGPGSIARSYRTARTTMSVGKQRMPEQRCYFYQDLILPVLLDSLRG
GWQADELVRPLARLKATDGNGLLRRTLTSWFHHNVQPTATSKALYIHRNTLEYRLNRISE
LTGLDLGNFDDRLLLYVALQLDNNHL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatatcatctcgatgcaaagctggcgcaacaaattgttgcccgcacaatgcaa
attattgatagtaatgtgaatgtcatggatggtcgcggacggattatcggcagcggcgat
gatcagcgtcttggtgaattgcacgaaggcgcactgctggcgatttcgcaggagcgcatt
gtcgacatcgacgagggcgttgcacggcatttgcacggtgtacgtccgggcatcaacctg
ccgttgcgtatcgacggtcagatcgtgggcgttatcggcctgacgggcaatccgtcccag
ttgcgtcagtatggcgagctggtgtgtatgaccgccgaaatgatgctcgaacaggcgcgt
ctgctgcacatgctggcgcaggacagccgtctgcgggaagaactggtgcttaacctgatt
cgtgtggatgaactctctccggcactgatggagtgggcgcagcgtctgggcatcgacctc
aaccggccacgtgtcgcggcggtggtggaagtcgacagcggacagctcggtgtggactct
gccatggcagaactgcaacaactgcaaactttactgaccacgccggagcgtgacaatctg
atcgctatcgtttccctcaccgaaatggtggtgctgaaaccggccctgaacagctacgat
cgctgggatccggagggccaccgccagcgcattgatcatctgctgtcgcgcatgaccgaa
actggtcgtctgcgcgtgcgcatttcccttggcaacttttttaccggccctggcagcatc
gcccgttcttatcgcaccgcacgtaccaccatgagtgtgggcaaacagcggatgccggaa
cagcggtgttacttctatcaggatctgatcttacccgtgctgctcgacagcctgcgtggc
ggctggcaggccgatgaactggtgcgtccgctggcgcgtctgaaagcgacggatggcaac
ggattactgcgccgcacactgacgtcgtggttccaccataatgttcagccgaccgctacg
tctaaggcactgtatattcatcgtaatacgctggaatatcgcctcaaccgtatctcggaa
ttaaccggcctggatctggggaacttcgacgatcgtttattgctgtacgtggccctgcaa
ttagataacaaccatctgtga
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