Rahnella aquatilis HX2: Q7S_19150
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Entry
Q7S_19150 CDS
T01850
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
raa
Rahnella aquatilis HX2
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
raa03009
]
Q7S_19150
03016 Transfer RNA biogenesis [BR:
raa03016
]
Q7S_19150
Enzymes [BR:
raa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Q7S_19150
5.4.99.29 23S rRNA pseudouridine746 synthase
Q7S_19150
Ribosome biogenesis [BR:
raa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q7S_19150
Transfer RNA biogenesis [BR:
raa03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Q7S_19150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AFE60039
LinkDB
All DBs
Position
4178611..4179312
Genome browser
AA seq
233 aa
AA seq
DB search
MSEHQPTIPEPSKTRPLENYNPPTDPWLQVIFQDEHIMVVNKPSGLLSVPGKLAEHQDSL
MTRIQQEFPEAESVHRLDMSTSGVIVVALTKDAERELKRQFRERETKKVYIARVWGRVEE
DYGIIDLPLICDYPNRPKQKVCHETGKKALTQYEVMSWDDDGTTRVKLRPITGRSHQLRV
HLLALGHPILGDKFYAHPQALAAAGRLQLHAQELSFYHPITDAPLVFNCEPDF
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacatcaaccgactatccctgaaccgtcgaaaacccggccgctggagaattac
aatccgccgaccgatccctggttacaggtgatttttcaggatgaacacatcatggtggtc
aataagccgagcgggctgctttccgtgccgggcaagcttgccgagcatcaggacagcctg
atgacgcgtattcagcaggaatttcctgaggctgagtccgtccatcgtctggatatgtcc
accagcggcgtgatcgtggtggcgctgaccaaagacgctgagcgtgaacttaaacgccag
ttccgcgaacgcgaaaccaagaaagtgtatatcgcgcgggtctggggacgggttgaagaa
gattacggcattatcgatttgccgctgatttgcgattatcctaaccggccgaaacagaag
gtctgtcacgagaccggcaagaaagcgctgacgcagtatgaagtgatgtcatgggatgat
gacggcacaacgcgggtgaaactgcggccgatcaccggacgttcgcaccagttgcgcgtg
caccttctggcgctcgggcatccgattctgggcgataaattctatgcccatccgcaggcg
ctggcagcggccggtcgtttgcaactgcacgcacaggaattatcgttttatcatccgata
accgatgcgccgctggtatttaactgcgagccggatttttaa
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