Rahnella aquatilis HX2: Q7S_21525
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Entry
Q7S_21525 CDS
T01850
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q7S_21525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
raa03019
]
Q7S_21525
03400 DNA repair and recombination proteins [BR:
raa03400
]
Q7S_21525
Enzymes [BR:
raa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q7S_21525
Messenger RNA biogenesis [BR:
raa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q7S_21525
DNA repair and recombination proteins [BR:
raa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q7S_21525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFE60510
LinkDB
All DBs
Position
complement(4721503..4723335)
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AA seq
610 aa
AA seq
DB search
MSTAAVINKEELAHQVLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLY
IAPERLMMGDFLEQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIAL
TATADEATRNDIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ
QDVERHKLNAMNAFAEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKAL
SVVARVGQRFGLGYVVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLG
LITQNIAMHSALQLTESARPVLRGEIPLQLAVPRIQTLKIKSSASQKTYGGNYDRKLFAK
LRKLRKSLADDNNVPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAM
IRDHIDNGDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggcagtgataaacaaagaagagctggctcatcaggtattacgcgatacc
ttcggctatcagcaattcagaccaggccagcaaactatcatcaataccgccctttctggc
cgggattgtctggtagtgatgccaacaggcggcggtaaatcgctgtgctatcaaattccc
gcgctggtgatggacggcctgacgctggttgtttcgccgctcatctcgctgatgaaagat
caggtcgatcagctgatggctgcaggcgttgaagccggttgcctgaactcaacgcaaacc
cgtgagcaacagctggaagtgatggccggttgccgtgcgggacgtatcaaaatgctgtat
atcgcgccggaacgcctgatgatgggcgatttcctcgagcagctgcaacagtggaatccg
gcgatgcttgccgtggatgaagcccactgtatttcccaatggggccacgatttccgtccg
gaataccgcgccctgggtcagctcaagctgcgttatccgcaactgccggtgatcgccctg
accgcgaccgccgatgaagccacccgtaacgatatcgtccgcctgctggaactgaacgat
ccgctgattcaggtcagcagttttgaccgtccgaatatccgttacacgctggtggaaaaa
tttaagccgctcgatcagctgattcgttttgtgcaggatcagcgcggtaaaagcggcatt
atttactgtaacagccgtgccaaagtggaagacacagccgcccgtctgcaaagccgcggg
ctgagcgtcggcgcgtatcacgccgggctggataacgacacccgcgctcgcgtgcaggaa
ggtttccagcgcgacgacctgcaaattgtggtcgccaccgtcgccttcgggatgggcatc
aacaaacctaacgtgcgttttgtggtgcactttgatattccacgcaccatcgagtcttat
tatcaggaaacgggccgggcagggcgtgacggcctgcctgccgaagcggtgctgctttac
gatccggctgatatggcctggctgcgccgctgtctggaagagaaaccggcgggcgctcag
caggatgttgaacgccataagctgaatgccatgaatgcgtttgcggaagcgcaaacctgc
cgccgtctggtgctgctcaattacttcggtgaaggcaaacagaacgcctgcggtaactgc
gatgtgtgtcttgacccgccaaaacgctatgacggtttgctggatgcgcagaaagcgttg
tcggtcgttgcgcgcgtcggacaacgttttggcttagggtatgtggtcgaagtgctgcgc
ggttcgaacaaccagcgtatccgcgaatacggccacgacaagctgactgtgtacggcatc
ggcaaagaacacagcaacgaacactggaccagcgtggttcgccaactgatccatctcggg
ctgattacgcaaaatattgccatgcactcagcgttacaactgacggaatcggcgcgtccg
gttttacggggcgaaatcccgttgcagttggccgtgccgcgtattcagacgctcaaaatt
aaaagcagtgccagccagaaaacttacggcgggaattacgatcgtaagttgtttgctaaa
ttgcgtaaactgcgtaagtcactggcggatgacaataatgtgccgccgtacgtggtattt
aacgacacgacgctgctggaaatggctgaacatctgcccgtcagcgcgagcgatttgctg
gacatcacgggtgttggtcagcgtaagctggagaaattcggcaggccatttatggcgatg
atccgcgatcacatcgataacggcgacgaataa
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