Rahnella aquatilis HX2: Q7S_22080
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Entry
Q7S_22080 CDS
T01850
Name
(GenBank) O-antigen polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa00540
Lipopolysaccharide biosynthesis
raa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Q7S_22080
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
raa01005
]
Q7S_22080
Enzymes [BR:
raa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
Q7S_22080
Lipopolysaccharide biosynthesis proteins [BR:
raa01005
]
Core region
Q7S_22080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Ig-like_KY
Motif
Other DBs
NCBI-ProteinID:
AFE60621
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All DBs
Position
4855102..4856388
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AA seq
428 aa
AA seq
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MKSNLMAQIKKSSFDDKLASLLFLLITISISFFMYSGEITRNFFYIATYIAVLYFIYVTL
RVDKKIKFYPVACTILLLGISKLLWVMLTVNHQYPLIAYHYQISGKRLILASFILYAIEH
NIHKWKIPTLTVRTGIAIMTILFIVISVIRIIVYLKTGERMKINSDAPTSGAYTFTIFSL
LVMYSLKYHALKHYRLICLIVMTLTFAVLAATETRSAIILFILISAGSIIYDFTKSSHTS
KIIYGFAIAVLIIAAVTSGHPYYNKVLTRFDNLQNEVTSYNDGERNTSVGARFSMWRAGV
DAFKHHPFGQSADSRNALATTFIDEHEGGNPEALRNLQFHLHNDIIDTMSLQGIFGALIM
VLFFAVLLLYPFRLVPKGYEFLLLSVPVIYFSMGDTQFYNRESPYFIVLVFAYLMMLRMR
PHPAIEKQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaatctgatggcacagataaaaaaatcgtcttttgacgataaacttgcatct
ttactattcttattgattaccatttccatttctttctttatgtactctggtgaaataacc
cggaatttcttttatatcgcaacgtatattgctgtcctgtatttcatctacgtcaccctg
cgtgttgataagaaaattaaattctacccggttgcctgcacaattctacttctgggtatc
agcaagttgctttgggttatgctcaccgtaaaccatcaatatccgctcattgcctatcat
taccaaattagcggtaagagactcatattagcttcatttattctgtatgccattgaacat
aacattcacaaatggaaaatccccacactgacagtgcgcacggggatagctattatgacg
attctttttattgttatatccgtcatacgaatcattgtttatttaaagacaggcgaaaga
atgaaaataaattctgacgccccgacttccggcgcctatacatttactattttttctttg
ctggtgatgtacagtcttaaatatcatgcgttaaagcattacaggctcatttgtctgatt
gtgatgacgctaacttttgcggttctcgctgccacagaaacccgctctgcaataatactc
tttatacttattagtgcaggcagcattatttacgatttcaccaaaagctcgcatacgtct
aaaattatctacggttttgccattgcggtcttaattattgccgccgtgacttctggtcat
ccttattacaataaagtcctcacccgcttcgataatctccaaaacgaggttacctcttac
aatgacggggagcgtaatacttcagtcggtgcgcgtttctcaatgtggcgagccggagtg
gatgctttcaaacatcacccgtttggtcagtccgccgacagccgcaatgcacttgccacc
acgttcatcgatgagcatgaaggcggaaacccggaagcgttacgcaatcttcagttccat
ttgcacaatgatattatcgatacaatgtcattacagggaatttttggcgcattgattatg
gtacttttcttcgccgtattattgctctatcccttcaggctggtgcccaagggttacgaa
tttttattactgtcggtcccggtaatttacttcagcatgggtgatacccagttttacaat
cgcgaatcaccgtattttattgtgctggtatttgcctacctgatgatgctcaggatgagg
ccacatcccgcgatagaaaaacaatga
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