Rahnella aquatilis HX2: Q7S_23921
Help
Entry
Q7S_23921 CDS
T01850
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa00300
Lysine biosynthesis
raa00470
D-Amino acid metabolism
raa01100
Metabolic pathways
raa01110
Biosynthesis of secondary metabolites
raa01120
Microbial metabolism in diverse environments
raa01230
Biosynthesis of amino acids
Module
raa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Q7S_23921
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q7S_23921
Enzymes [BR:
raa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Q7S_23921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFE60938
LinkDB
All DBs
Position
PRA1:236412..237719
Genome browser
AA seq
435 aa
AA seq
DB search
MSAFPPDSQFISTEKIDDIPYQRLADRVPTPFYAYSASQIKADFSALKKSLPDEIHYFYS
LKANPNKTLVQLLNREGTGCEVCSLAELETVISQGVPPEDIIFVGPGKYIAELTQCCRIG
IKAVVIESIEEIKLLNDIAASMGVIQTIALRINPEFTGEKAKLVMSGKPRQFGIDEQLLP
QAFACVAQQENLRLAGIHIYLGTRILDWQALAKNTLNILSLAGSLQEIYKVDFDFVDVGG
GFGVRYFDKEKPLDIVALGGALAPVIRNYHDKFPRCKIIVELGRYLIARAGIFVTRVNYL
KPSRDEWFAVCDGGANCHGSAAGINSLIRRNFPMARLGETRAGTQHRYQVTGPLCTPTDI
LGENIMLAELHPGDLIGIGHSGAYGASASPVNFLSFGHPAEILVEKGQAFLIRTADSIET
LLAPQICQPLSVGNA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttttcctcctgatagccagtttatcagtacagaaaaaatcgacgacattcct
tatcagcgtctggctgacagggtgccgacgccgttttatgcctacagcgcctcgcaaata
aaggccgacttttcagcattaaaaaagtcacttccggatgagattcattatttttattcg
ctcaaagctaatcccaataaaacactggttcagttgttaaaccgggaaggaacaggttgt
gaagtgtgttctctggcagaactggaaacagtgataagtcagggtgtgcccccggaggat
attatttttgtgggtcccggaaaatacattgctgaattaacccaatgttgtcgcatcggt
attaaagctgtcgtcatcgaatccattgaagaaataaaacttctgaatgatattgctgcc
agcatgggcgttatacaaaccatcgccttgcgcatcaaccctgagtttacgggcgaaaaa
gccaaactggtgatgagcggcaaaccacggcaatttggcatcgacgaacaacttttaccg
caggcatttgcctgtgtcgcgcagcaggaaaatttacgactggcggggatccatatttat
ctcggtacacggatcctcgactggcaagcgctggctaaaaataccctgaatattctgtca
ctggcgggatctttgcaggagatctacaaggtcgattttgattttgtcgatgtcggcggg
ggttttggcgtcaggtattttgataaagaaaagccactggatattgttgcgctcggtggc
gcgttagcgcccgttatccgcaattatcatgacaaatttccgcgctgtaagatcatcgtc
gaactgggcagatatctgattgcccgtgcaggcattttcgtcacccgcgttaattatctt
aaaccctcccgggacgaatggttcgcggtgtgtgatggcggagccaactgtcacggcagc
gccgctggcatcaactcgctgatccggcgtaattttccgatggcccgtctgggtgaaacc
cgtgccgggacacaacatcgttatcaggtcaccggcccgctttgtacccccaccgatata
ttaggtgaaaacattatgctggcggaactgcatccgggcgacctgatcggcatcggacat
tcaggcgcatacggggccagtgcttcacccgtcaactttttaagttttggtcatcccgcc
gaaattctggtggagaaaggtcaggctttccttatccgaaccgcagatagcattgagaca
ttattggcacctcagatatgtcagcctttatctgtcggaaatgcctga
DBGET
integrated database retrieval system