Rickettsia amblyommatis Ac37: AL573_03650
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Entry
AL573_03650 CDS
T04237
Name
(GenBank) Pmetallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rab
Rickettsia amblyommatis Ac37
Pathway
rab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL573_03650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rab03019
]
AL573_03650
Messenger RNA biogenesis [BR:
rab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AL573_03650
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_6
DUF4587
DUF826
Motif
Other DBs
NCBI-ProteinID:
ALA61787
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Position
689995..691677
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AA seq
560 aa
AA seq
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MSSFNIKNHKNDLLFVPLGGSNEIGMNLNLYHYQGKWLMIDCGSGFADDYLPGVDMIIAD
SSFIEKYKKDIVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFAKN
IKIHEVKPGSKINLDPFSLAMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPILGKK
ADEELLKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIVGCPQMVVVSTFASNL
ARLDTIIHAAGLASRKVVLTGRSLHRMMLAAQESDYLKDIAPLISERDVSRFRREELLVI
ATGCQGEPMAATAKLASNSHPSIKLVPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVI
TERDHFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQAVKVEN
GSVVLLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRRMRESGIVVASVVINKKGL
LAANPMLSMPGLLDPKEDMALVNLIKNDIKELVTIQNKQAKKALSDEQVIEAIKGTIRKT
LKQEINKSPVIIVNLEKAVE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattcaacatcaaaaatcataaaaatgatctgctatttgtaccgctaggggga
tctaatgaaataggtatgaatcttaatctttaccattatcaaggtaaatggttaatgatt
gattgtggtagcggttttgccgatgattatttacccggtgttgatatgataattgctgat
agcagctttatagagaaatataaaaaagatatagtaggtctgattttaactcatgctcac
gaggatcatttaggtggagtccaatatttatggaatagccttaaatgtcctatttatact
actacttttacagcaaattttttaaaaattcgtttaaatgaatatgattttgctaaaaat
atcaaaattcatgaagtaaaacccggtagtaaaataaatctagatcctttttccttagcg
atggtgccactgactcactcggctcctgaaatgcaagcaattatgatccgtacggatgca
ggtaatattttacatacgggagattggaaatttgataatgatccgatacttgggaaaaaa
gccgatgaggagcttttaaaatcttacggagatgaaggggtgcttgcacttgtttgtgat
tcaactaacgtatttaataaaggaagctcaggttctgagggggatgttagaaaaagttta
gtagatattatagtcggttgtcctcaaatggtagtagtttcaacctttgcctctaattta
gcacggcttgatacaataattcatgctgcagggcttgcgagtagaaaagtagtcttaacc
ggtagaagtttgcaccgtatgatgcttgctgcgcaggaaagcgactatttgaaagatatt
gctcctctaattagtgaacgtgatgttagcagatttagaagagaagaattattagtaatt
gctaccggttgtcaaggtgagcctatggctgccaccgcaaaactggctagtaattctcac
ccgtctataaagcttgttcctaaggatacaatgattttttcttcaaaaattattccgggt
aatgaaaagaaaatattcaggctatttaatatatttgttaaagccggtgtagaagttatt
accgagcgagaccattttgtacatgtttcaggacatccatcgattgacgagctacaaaaa
atgtattctctaattagaccgaatatttgtatacctgttcacggtgagcctgtacatatt
catgaacatgttaagcttgctaagaaaaacggcataaaacaggcagtaaaggttgaaaac
ggtagtgtagtactgcttgaacctaataatgcaaaagtaatttcaaaggttgaaaatggt
tatttagctgttgacggtaattatttgctgcccgttgaatctccgattttcaaagctaga
agacgtatgcgtgagtcgggtatcgtggtagcatcagtagtcattaataaaaaaggactg
cttgctgcaaacccaatgctgtctatgcccgggctgcttgatccgaaagaggatatggca
ttagttaacctcattaaaaatgacattaaagaacttgttaccattcaaaataaacaggct
aaaaaagcattgtcggatgaacaagtaatcgaggcaataaaaggaacaattcgtaaaacc
ttaaaacaagaaattaataagtcacccgttataatagtaaatcttgagaaagctgtggag
tag
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