Rickettsia amblyommatis Ac37: AL573_03890
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Entry
AL573_03890 CDS
T04237
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rab
Rickettsia amblyommatis Ac37
Pathway
rab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL573_03890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rab03019
]
AL573_03890
03016 Transfer RNA biogenesis [BR:
rab03016
]
AL573_03890
Enzymes [BR:
rab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AL573_03890
Messenger RNA biogenesis [BR:
rab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AL573_03890
Transfer RNA biogenesis [BR:
rab03016
]
Prokaryotic type
tRNA degradation factors
AL573_03890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
KH_DUF2096_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
ALA61818
LinkDB
All DBs
Position
complement(734865..737111)
Genome browser
AA seq
748 aa
AA seq
DB search
MFNEITKSITWNGKVLELSTGKIARQADGAVTVKMGNSVLLCTAVVANKAKEGIGFFPLT
INYREMAYAAGKIPGGFFKREGKASDREVLVSRLIDRPIRPLFHPAFVNETHVTCSVLSY
DPETPVDILAIIGASAALSLSPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTSDSVMMVESEAYLRSEEQMLEAVKFGFESFQPVIKIIKELAEEAKKPKLEMQDLYPAS
LKKEIEKLFVKEIEQAFAIKSRQERSTNLDLILGKVLTHFVSDIENKKYSNYQIESALKA
IESDILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLALRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAQVAGIAMGLVKEGKKFAVLS
DILGDEDYFGDMDFKVAGTSEGITALQMDIKISGVDFKIMKVALEQARLGRLHILEQMNK
VISKPNNELSKNAPSTTTIKIDKDKIRDIIGPGGKVIKEICETSGAKIDISDDGTVSVYA
SDRDKLKVALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEVSEERI
ETVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNADKDKASNNTKPKTNVNNAKDNSEPEQR
RDSSKKRAWNEDNNAETAEVITERKYFN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaataactaagagtattacatggaacgggaaagttcttgagcttagtaca
ggtaaaatagcaaggcaagctgacggggcagttacggtaaaaatgggtaattccgtttta
ttatgtacggcagtagtagctaacaaagcaaaagagggtataggtttttttcctttaaca
attaattatagagaaatggcatatgctgccggtaagataccagggggattttttaaacgt
gagggaaaagcatcagatagagaagttttagtatctcgtttaatagatagaccgattaga
ccattatttcatccggcttttgtgaatgaaacgcatgtaacttgcagtgttctttcatat
gatcctgaaactccggtagatatacttgcaattatcggtgcatcggctgcacttagccta
tcccctgctccttatctagaaatagttgcggcaagtaaagtaggtttaatcaatggtgaa
tttgttttaaatccaacacttgaattattaaaaacaagtcagcttgatttagtagttgca
ggaacatcagattcagtaatgatggttgaatcggaagcttatttacgctctgaagaacaa
atgttagaagccgtaaaatttggatttgaaagctttcagccggtaataaagataattaaa
gaactagcagaagaagctaaaaaaccaaaacttgaaatgcaagatttatatcctgcttca
ttaaagaaagaaattgagaagttatttgtaaaagaaattgaacaagcttttgcaattaaa
tctagacaagaacgtagcactaatttagatttaatacttggaaaagttcttacacatttt
gtaagcgacatagaaaataaaaaatatagtaattatcaaatcgaatcagctttaaaagct
attgaatcagatatattacgtaacgagattttagaaaaaaatagacgtatcgatggaaga
agtaccacggatataagacaaattgcttgtgaaataggtttactaccttccgcacatggt
tcagctttatttactagaggtgaaacgcaaagcttagttagtactacattcggtactagt
ttagatgagcagatagttgacagtttagagggtgagtataaagagcgttttatgctcaat
tatatctttccgccctactctgtaaatgaagcaatgcctatgaaagcacctagtcgtcgt
gaagtcggacacggtaaactcgcattgcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgccgaaactacggagtctaacggttcttcttca
atggcaactgtttgcggtagttctcttgctttaatgtatgccggcgtaccgataaaagca
caggttgcgggtattgctatgggacttgttaaggaaggcaaaaaatttgccgtattatcg
gatattctcggcgatgaagattatttcggtgatatggactttaaggttgcaggaactagc
gaagggattactgcattacaaatggatatcaaaatatccggagtagattttaaaataatg
aaagtagctttagagcaagcacgactcggtcgtttgcatatactggagcaaatgaataaa
gttatcagtaaaccaaataacgaactaagtaaaaatgctccttctactactactataaaa
atagataaggataaaattagagatattataggaccaggcggtaaagtaataaaggaaatt
tgtgaaactagcggtgctaaaatagatataagcgatgacggtacggtgtctgtttatgct
tcagatagagataagctaaaagttgccttagataaaattaaagctattgccgttgaacct
gaaatcggtgaaatatttaacggtacggtaatgaaagtcttagattccggtgcttttatt
aattatttaggtaataaagacggctttgttcatattagtgaagtttcagaagaaagaata
gaaacggttagcagtgttttaaaacaaggcgatatagtaaaagtgaagctaataggcttt
gataataaaggcaaggcaaaattaactattaaaaatgctgataaagataaagcttcaaat
aatacaaagccaaaaactaatgttaataatgctaaggacaattcagaacctgagcagcga
cgtgattctagtaaaaaacgagcttggaatgaagataataatgctgaaactgctgaagta
attacagaacgtaagtattttaattga
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