Rodentibacter abscessus: THUN1654_00660
Help
Entry
THUN1654_00660 CDS
T10998
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
rabs Rodentibacter abscessus
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rabs03009
]
THUN1654_00660 (srmB)
Enzymes [BR:
rabs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
THUN1654_00660 (srmB)
Ribosome biogenesis [BR:
rabs03009
]
Prokaryotic type
rRNA helicases
THUN1654_00660 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BFU59229
LinkDB
All DBs
Position
72970..74292
Genome browser
AA seq
440 aa
AA seq
DB search
MNLSRFEQFDLSPELLKALDKKGYSRPTAIQLGAIPAAMEERDVLGSAPTGTGKTAAFLL
PALQHLLDTPRRKPGPPRILILTPTRELAIQVAEQAEELSQFTHLKIATITGGVAYQNHG
EVFNTNQDLVVATPGRLLQYIQEENFDCRSVEILIFDEADRMLQMGFGQDAEKIAAETRW
RKQTLLFSATLEGELLIDFTKRLLNDPVKIESEPSRRERKKINQWYYHADSKEHKIKLLA
RFIETEEVSRGIVFVRRREEARELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKSGVVT
VLVATDVAARGIDIDDITHVLNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
GKIKRYTEEILKARILEGLEPRTKPPKDGEVKSVSKKQKARIKEKREEKKKAETKKKTKL
RHKDTKNIGKRRKPSSIQEG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcccgatttgaacaattcgatctttcccccgaacttctcaaagccctagat
aaaaaaggctattcccgcccgacagccatccaacttggagctattccggcagcaatggaa
gagcgtgatgtgttgggttccgcaccgaccggcacggggaaaaccgcagcgtttttattg
ccggcattacaacatttgttagatactccccgccgtaaacccgggccgccgcgtatttta
atactgacaccaacgcgtgaactggcaatccaagttgcggaacaagcggaggaattgtcg
caatttacccatttgaagattgcaacaatcacaggtggcgtagcgtaccagaatcacggt
gaagtattcaataccaatcaagatcttgttgtggcaacaccggggcgtttattgcaatac
attcaagaagaaaactttgattgtcgttcggtggagattttgatctttgacgaagcggat
agaatgttacaaatgggctttggacaagatgcggaaaaaattgcagcggaaacccgttgg
cgcaaacaaactttgcttttctcagccactcttgagggcgaattattgatcgattttacc
aagcgtttgttaaatgatccggtcaaaatagagtctgaaccaagtcgccgtgaacgcaag
aagatcaatcaatggtattaccacgcagacagtaaagaacacaaaattaaattgcttgcc
cgttttattgaaacggaagaggtaagccgaggaattgtttttgtacgccgccgtgaagag
gctcgagaactttcagaaaccttgcgaaagcgtggtattcgttccacttatttggaaggt
gaaatggcgcaaactcagcgcaataacgccattgataaacttaaatcaggtgttgtaacg
gtattggtggcaacggatgttgcggcacgtggcattgatattgatgatattacccacgtg
ttgaattttgacctaccatatagcgcagatacttatttgcaccgtatcggacgtactgcc
cgtgccggcaaaaaaggcacggcggtttcttttgtggaagcgcacgattataaattactc
ggcaaaatcaaacgttatacggaagaaattttaaaagcacgtattttagagggattagaa
cctcgcactaaaccaccaaaagacggcgaagtaaaatccgtcagtaaaaaacaaaaagca
cgaattaaagaaaaacgtgaagaaaagaaaaaagccgaaacgaagaaaaagacaaaattg
cgccataaagatacaaaaaatatcggcaaacgccgtaaaccgagttcaatacaggaaggt
tag
DBGET
integrated database retrieval system
