Rodentibacter abscessus: THUN1654_01020
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Entry
THUN1654_01020 CDS
T10998
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
rabs Rodentibacter abscessus
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rabs03000
]
THUN1654_01020
Transcription factors [BR:
rabs03000
]
Prokaryotic type
Other transcription factors
Others
THUN1654_01020
BRITE hierarchy
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_50
AAA_2
AAA_5
AAA
HTH_11
Bac_DnaA
NAPRTase_N
AAA_22
AAA_7
HTH_36
HTH_38
Motif
Other DBs
NCBI-ProteinID:
BFU59265
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Position
112369..113325
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AA seq
318 aa
AA seq
DB search
MISKFDPKYPFDCFVTHSETMKSAVENAQRFAMFDVPLLIQGETGTGKDLLAKACHHQSL
RRENKFIAVNCAGLPDEDAESEMFGRKVGESETIGFFEYANEGTVLLDGIAELSLNLQAK
LLRFLTDGSFRRVGEEKEHYANVRVICTSQVPLNQLVELGKVRADLFHRLNVLTVNVPPL
RERVEDIQPLTEIFLQEISETLKTKTPTFDSDFLTYLQQYDWEGNVRELYNTLYRACSLA
KDNRLSIESLSLTLPESAVISISEFENQTLEEIIGQYESKVLRMFYAEFPSTRKLAQRLG
VSHTAIANKLKQYGIGKP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatctctaaatttgatcctaaatatcctttcgattgctttgttactcatagcgagacg
atgaaaagtgcggtagaaaatgcgcaacgttttgcgatgtttgacgtacctttgttaatt
caaggcgaaaccggtacgggtaaggatttgctggcaaaagcctgccatcatcaaagtttg
cgtagagagaataaatttatcgccgtaaattgtgccggtttaccggacgaagatgccgaa
agtgaaatgttcgggcgaaaagtgggggagagcgaaactatcggcttttttgaatatgct
aatgaaggtacggtgttactggatggtattgccgaattgtcgctaaatctgcaagcaaaa
ttgctccgttttttaacggacggttcatttcgccgagtgggtgaagaaaaagagcattat
gctaatgtgcgggtgatttgtacttcacaggtgccgctaaatcaattggttgagttggga
aaggtacgggcggatttatttcatcgtttgaatgtgctaacggttaatgtgccgccatta
cgtgagcgtgtggaggatattcaacctctgaccgaaatttttctgcaagaaatcagtgaa
accttgaaaacaaaaacgccgacctttgattcggatttcctcacttatttgcaacaatat
gattgggaaggtaatgtacgcgaactttataacacgctatatcgggcttgttctttggca
aaagataatcgcttgagtattgaaagtttaagtttgacattgccggaaagtgcagtcatt
tctatcagtgaatttgaaaaccaaactttagaagaaattatcgggcaatatgaatccaaa
gtacttaggatgttttatgccgaatttccaagtacaagaaaactggcgcaacgattgggc
gtttctcatacggcgattgcgaataaattgaagcagtatggaattggaaagccataa
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