Rodentibacter abscessus: THUN1654_01310
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Entry
THUN1654_01310 CDS
T10998
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rabs Rodentibacter abscessus
Pathway
rabs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THUN1654_01310 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rabs03019
]
THUN1654_01310 (orn)
03009 Ribosome biogenesis [BR:
rabs03009
]
THUN1654_01310 (orn)
Messenger RNA biogenesis [BR:
rabs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THUN1654_01310 (orn)
Ribosome biogenesis [BR:
rabs03009
]
Eukaryotic type
Pre-60S particles
RNases
THUN1654_01310 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BFU59294
LinkDB
All DBs
Position
complement(147187..147735)
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AA seq
182 aa
AA seq
DB search
MQLNKQNLIWIDLEMTGLDPEKERIIEIATVVTDKNLNILAEGPVLAIHQSNELLERMSD
WCIKTHTANGLVERVKTSKLTERAAELQTLDFLKRWVPKGASPICGNSIAQDKRFLYKYM
PDLADYFHYRHLDVSTLKELATRWKPEILEGFKKGNTHLALDDIHESIKELAYYRDHFIK
LD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaaataaacaaaatctgatttggattgatttggaaatgacagggttagatccc
gaaaaagaacgtattattgaaatcgccaccgtcgttacggataaaaatctcaatattctt
gcagaaggcccggtgcttgcaatacatcaaagtaatgaattattggaaagaatgtcggat
tggtgcataaaaacccatacggcaaacggcttggtcgagcgtgtaaaaacaagcaaatta
accgaacgagcggcagaattacaaacgctggatttcttaaaacgctgggtgcctaaaggt
gcttctcctatttgtggcaatagcatcgcacaagataaacgctttctctacaaatatatg
ccggatttagcggattattttcactaccgtcatttagatgtcagcaccctaaaggagtta
gcaacccgctggaagcctgagattttagagggtttcaaaaaaggtaatacacatttggca
ttggatgatattcacgagtcaattaaagaattggcttattatcgtgaccatttcatcaaa
ttagattga
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