Rodentibacter abscessus: THUN1654_02710
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Entry
THUN1654_02710 CDS
T10998
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs03030
DNA replication
rabs03430
Mismatch repair
rabs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THUN1654_02710 (holD)
03430 Mismatch repair
THUN1654_02710 (holD)
03440 Homologous recombination
THUN1654_02710 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rabs03032
]
THUN1654_02710 (holD)
03400 DNA repair and recombination proteins [BR:
rabs03400
]
THUN1654_02710 (holD)
Enzymes [BR:
rabs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THUN1654_02710 (holD)
DNA replication proteins [BR:
rabs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THUN1654_02710 (holD)
DNA repair and recombination proteins [BR:
rabs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THUN1654_02710 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
BFU59434
LinkDB
All DBs
Position
314218..314625
Genome browser
AA seq
135 aa
AA seq
DB search
MNRRDLLLKEMGITQWQLHRPEVLQGAVGVAVAAHIRFIVVSDESLSQQPLFDDVLLSLE
LKKEDCLCLNYDQIQHLELNHSVRYWLLAENAEKIDRTLPYCLNAERVYRSPDYINFQTS
TIAKRELWQQIQQVQ
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacgcgatcttcttttaaaagaaatggggattacccaatggcaattacaccgt
cccgaagtgctacaaggggcggtgggtgttgcggttgctgcacatattcgatttattgtg
gtatcagatgaaagtttaagtcagcagcctttatttgacgatgtgctgcttagtcttgaa
ttaaagaaagaagattgcctttgtttgaattacgatcaaatccaacaccttgaattaaat
cattccgttcgttattggctattggctgaaaatgcagagaaaatcgaccgcactttgcct
tattgtcttaatgccgagcgggtgtatcgttcgcctgactacataaattttcaaacttca
acgattgccaaacgtgagctttggcagcagattcaacaggttcaataa
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