Rodentibacter abscessus: THUN1654_03880
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Entry
THUN1654_03880 CDS
T10998
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs00541
Biosynthesis of various nucleotide sugars
rabs01100
Metabolic pathways
rabs01250
Biosynthesis of nucleotide sugars
Module
rabs_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
THUN1654_03880 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rabs01005
]
THUN1654_03880 (kdsB)
Enzymes [BR:
rabs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
THUN1654_03880 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
rabs01005
]
Lipid A
THUN1654_03880 (kdsB)
BRITE hierarchy
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
NTP_transferase
AMP_N
Motif
Other DBs
NCBI-ProteinID:
BFU59551
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Position
447656..448420
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AA seq
254 aa
AA seq
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MSFTVIIPARFASSRLPGKPLADIAGKPMIQHVFEKAQQSGASRVIIATDNGKVAQTAEH
FGAEVCMTSEHHNSGTERLAEVVKKLAIADDEIIVNIQGDEPLVPPIIVTQVAENLAKFN
VNMATLAVKIREPEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMTLQEVAKAKLAD
AYLRHIGIYAYRAGFIKQYVQWEPTLLENLEKLEQLRVLWNGERIHVELAKAVPAVGVDT
AEDLEKVRSILAVN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaccgttatcattcctgcccgcttcgcttcatcacgtttgccgggtaaaccg
cttgccgatattgccggtaaaccgatgattcaacacgtttttgaaaaagcacaacaatcc
ggtgcaagccgtgtgattatcgccacagataacggaaaagtggctcaaacggcggaacat
tttggggcggaagtttgtatgacttcggaacatcacaattcaggcacggaacgtttagcc
gaagtcgtgaaaaaactggcgattgccgatgatgaaattatcgtcaacattcaaggcgat
gaacctcttgtcccaccgataatcgtgactcaagtggcggaaaatctggcgaaatttaat
gtgaatatggcaacacttgcggtaaaaattcgtgaacctgaagaattgtttaacccgaat
gcagtgaaagtacttaccgataaagacggctatgtattgtatttctctcgttccgtgatt
ccttacgatcgtgatcaatttatgacattgcaagaagtggcaaaagcaaaattagcggat
gcctatttgcgtcatatcggcatctatgcttatcgtgcgggctttattaaacaatatgta
caatgggaaccgaccctgttagaaaatctagaaaaactggaacaattacgtgttctatgg
aacggggaacgtattcacgtggaattggcaaaagccgtgccggcagtgggcgtggataca
gcggaagatttagaaaaagtacggtcgattttggctgtgaattaa
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