Rodentibacter abscessus: THUN1654_10960
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Entry
THUN1654_10960 CDS
T10998
Name
(GenBank) O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs00540
Lipopolysaccharide biosynthesis
rabs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
THUN1654_10960
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rabs01005
]
THUN1654_10960
Enzymes [BR:
rabs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
THUN1654_10960
Lipopolysaccharide biosynthesis proteins [BR:
rabs01005
]
Core region
THUN1654_10960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Anthrone_oxy
Motif
Other DBs
NCBI-ProteinID:
BFU60259
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All DBs
Position
complement(1281198..1282466)
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AA seq
422 aa
AA seq
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MQISKQNLLPFLVNCSISFFFLSVLAFKGGHNIAPFFLIALGIGYGVYGLFKKFKWNLSK
EDKWLIYSYIFYFAVFLLSLLMNDGRGRELDNPSRAVLLIPALMLLLRMPLKLCALIYAI
PLGSVIAGLVALYDKFVLHSQAAYGLRTIYIQAGDISMSFGLFSLVIGLYYWQKSQRKMT
ALCIVASLFGILGSILSTARGGWVALPIIFIVVLWIYRHSLSKGFFFVLATVFVIAITGV
TNMPNSRVMERLSFIQSDISNYEKNNANTSLGLRFDMWKSAILMIKEKPIFGWGADGATE
KRKQDVKVKAVRGNIGQFDHAHNQYLDDLSKRGIVGFIAFLGILLVPLRQFSLRLNSSSS
DIKLLATLGTVHILSVMIYCLSQGFFTHNSGNLFYFFLTLVFYAMLKQMEKSPLEEQSWK
KS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatatctaaacaaaatcttcttccgtttctggttaattgtagtatcagttttttc
tttttatccgttttggcatttaaaggcggacataatattgcgccgttttttctgattgca
ttagggatcggttatggcgtttacgggctatttaagaaatttaaatggaatttatcaaaa
gaagataaatggttaatttatagttatattttttattttgctgtttttttgctttcacta
ttgatgaatgacggaagaggtagggaattagacaacccaagtcgagccgtgttgttaatt
ccggccttaatgcttttattaagaatgccgttaaaactatgtgcgttaatttatgcaatt
ccgttaggctctgtcattgcaggattggttgccctttacgataaatttgttttgcatagc
caagctgcttatggtttgcgtacaatctatattcaagcgggcgatatttcaatgtcattc
gggctatttagtttagtgattgggctttattactggcaaaaatcacagcgtaaaatgacc
gcactttgtattgttgcttcgctctttggcatattggggagtattctttcaacggcacga
ggagggtgggtagcgttacctatcatctttatcgtggtgttgtggatttatcgtcattca
ctttcaaaaggttttttctttgtgctggcaacggtatttgttattgctattaccggcgta
acgaatatgccgaatagccgggtgatggaacgcctgtctttcattcaatccgatataagt
aactatgaaaagaacaatgccaatacgtctcttggactgcgttttgatatgtggaaaagc
gcaattttgatgataaaagaaaaaccgatttttggctggggcgcagatggtgcgacagaa
aaacgtaagcaggatgtgaaggtaaaagcggtaagaggcaatatcggacaatttgatcac
gcccataaccagtatcttgatgatttgtctaagcggggtattgtcggatttatcgctttt
ctcggcattttacttgtgccgttacgtcaatttagtcttcgattaaacagttcgtcttca
gatataaaattgctcgcaacattgggaacggtgcatattctttccgtgatgatttattgt
ttaagccaaggtttttttacgcataattcaggtaatcttttttactttttcttaaccctt
gttttttatgccatgttaaaacaaatggagaaatctcctttggaggaacaatcatggaaa
aaatcttag
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