Rodentibacter abscessus: THUN1654_11470
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Entry
THUN1654_11470 CDS
T10998
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs00300
Lysine biosynthesis
rabs00470
D-Amino acid metabolism
rabs01100
Metabolic pathways
rabs01110
Biosynthesis of secondary metabolites
rabs01120
Microbial metabolism in diverse environments
rabs01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
THUN1654_11470 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THUN1654_11470 (dapF)
Enzymes [BR:
rabs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
THUN1654_11470 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
BFU60310
LinkDB
All DBs
Position
1337771..1338595
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFVVVDAITQNVYFTPETIKRLADRHRSIGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVTLKGLTNKQDIAVSTQKGKMILTVREDGKIRVNMGE
PIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVLQVEDIRTANVAQLGPLLE
SHERFPERVNVGFMQVVNRNHIKLRVYERGAGETQACGSGACAAAAVGIMQGLLDHKVQV
DLPGGSLMIEWQGEGHPLYMTGEATHIYDGNIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttccaaaatgcatggtttaggtaatgattttgttgtggtggatgccatcaca
caaaatgtttatttcacaccggaaaccattaaacgccttgcagatcgccatcgcagtatt
ggttttgatcaacttttgattgtcgaaccgccttacgatcccgatttagattttcactat
cgaatttttaacgcagatggtagcgaagtggcacaatgtggtaatggtgcccgttgtttc
gcccgttttgttactctaaaaggcttaacaaataaacaagatattgccgttagcacacaa
aaaggaaaaatgattttaacagtaagagaagatggtaagatccgtgtcaatatgggcgaa
ccgatatgggaaccggcgaaaattccgtttactgcgaataaattcgagaaaaactacatt
ttgcgtactgacattcaaacggttctatgtggcgcggtttctatgggaaatccgcattgc
gtgcttcaagtagaagatattcgcacggcaaatgttgcgcagttaggcccgctgttggaa
agccacgaacgttttcctgaacgtgtgaacgttggttttatgcaagtagtaaatcgtaat
catatcaaactacgcgtttacgaacgtggtgccggcgaaacccaagcttgtggcagtggg
gcttgtgctgcggcagccgtagggataatgcaaggattattagatcataaagtacaagtt
gatttacccggtggcagcttaatgattgaatggcaaggggaaggacatccgctttatatg
acaggtgaagcgacacatatttatgacgggaatattcatctttaa
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