Rodentibacter abscessus: THUN1654_13240
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Entry
THUN1654_13240 CDS
T10998
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THUN1654_13240 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rabs03021
]
THUN1654_13240 (rpoA)
03400 DNA repair and recombination proteins [BR:
rabs03400
]
THUN1654_13240 (rpoA)
Enzymes [BR:
rabs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THUN1654_13240 (rpoA)
Transcription machinery [BR:
rabs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THUN1654_13240 (rpoA)
DNA repair and recombination proteins [BR:
rabs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THUN1654_13240 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
BetaGal_dom3
DUF6571
Motif
Other DBs
NCBI-ProteinID:
BFU60487
LinkDB
All DBs
Position
complement(1544096..1545079)
Genome browser
AA seq
327 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISPTHTKVILEPLERGFGHTLGNALRRILLSSMPGYAVTEVE
IEGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVILTLNKSGIGPVVAADITHDGD
VEIVNPDHVICHLTDENVSINMRIRVQRGRGYVPASARTQPDERPIGRLLVDACYSPVDR
ISYNVQAARVEQRTDLDKLIIELETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRQPEV
KEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASRGLSLGMRLENWPPASIAED
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaaaccacgcttagtagatattgagcaaattagc
ccaactcatactaaggtgatccttgaaccattagagcgtggttttggtcatactctaggt
aatgcattacgtcgtatccttctgtcttcaatgccgggttatgctgtaactgaggtagaa
atcgaaggagtattgcatgaatatagtagtaaggaaggtgttcaggaagatattcttgaa
gtgcttttaaaccttaaaggtctagcggttaaagtacagaataaagatgatgttattctg
acattaaataaatctggaattggccctgttgttgcagcggatattacccatgatggtgat
gttgaaattgttaatccagatcacgtaatttgtcatttgacagatgaaaacgtatctatc
aatatgcgtattcgtgttcagcgtgggagagggtatgttccggcttcggctcgtactcaa
ccggatgaacgcccgataggtcgcttactcgtagatgcttgttatagtccggttgatcgt
atttcttataatgttcaagccgctcgtgttgaacaacgtacggacttagataagttaatc
attgagttagaaactaatggtacgttagatccggaagaggcgattcgtcgtgcagcaaca
atcttagcagagcaactcgatgcattcgttgatttacgtgatgttcgtcaacctgaagtt
aaggaagaaaaaccggaatttgatccgattttattacgtcctgttgatgacttagagttg
acagttcgttctgctaactgtttgaaagcagaaacaattcactatatcggtgatttagtc
caacgtacggaagttgagttattaaaaacgcctaatcttggtaagaaatcccttactgaa
attaaggacgtgctcgcttctcgtggcttatcacttggtatgcgccttgagaattggcca
ccagcaagtattgctgaagactag
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