Rodentibacter abscessus: THUN1654_14060
Help
Entry
THUN1654_14060 CDS
T10998
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs00300
Lysine biosynthesis
rabs00470
D-Amino acid metabolism
rabs01100
Metabolic pathways
rabs01110
Biosynthesis of secondary metabolites
rabs01120
Microbial metabolism in diverse environments
rabs01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
THUN1654_14060 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THUN1654_14060 (lysA)
Enzymes [BR:
rabs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
THUN1654_14060 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BFU60569
LinkDB
All DBs
Position
complement(1646762..1648009)
Genome browser
AA seq
415 aa
AA seq
DB search
MNFFQYQNEKLYAEQLPVQQLAEQFGTPLYIYSRATLERHWHAFDSALGNHPHLICFAVK
SCSNIGVLSVMAKLGSGFDIVSQGELERVLTAGGDASKVVFSGVAKSREEIMRALAVGIR
CFNVESVSELKHINQIAGEMGKVAPISLRVNPDVDAHTHPYISTGLKENKFGISVDEARD
VYRLAADLPNVKIIGMDCHIGSQLTELQPFLDAADRLIVLMEQLKQDGIVLTHLDLGGGL
GVTYMDENPPHPSEYAKALLEKLKDYKDLEIILEPGRAISANAGILVAKVQYLKSNESRH
FAITDTGMNDMIRPALYEAYMNIVEIDRTLEREKAVYDVVGPVCETSDFLGKQRELAIAE
GDYIAQCSAGAYGASMSSNYNSRPRTAEVLVDGDKAHLIRRRESLQELWVLESVV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcttccaatatcaaaatgaaaaactctatgccgagcaattgccggttcagcaa
cttgcggaacaattcggtacaccgctttatatttattcccgcgcaacattagaacgccac
tggcatgcttttgattcggcattaggaaatcatccgcatttaatttgttttgcggtgaaa
tcttgttccaatattggtgtattgagcgtaatggcaaaattgggatcgggttttgatatt
gtttctcagggagaattggagcgcgtgcttaccgcaggcggtgatgcctcaaaagtggtg
ttttccggtgtggcgaaatcccgtgaagaaattatgcgagctttggcggtggggattcgc
tgctttaatgtagaatcggtttccgaactcaaacatattaatcaaattgcaggtgaaatg
ggcaaagtcgccccgatctctttgcgtgtaaatcctgatgttgatgcacacactcaccct
tatatctccacagggttgaaagaaaataaattcggaataagtgtagatgaagctcgggat
gtttataggctggcagccgatttaccaaatgtgaaaattatcggtatggattgccatatc
ggctcacaacttactgaattacaaccgtttctagatgccgctgatcgtttgatcgtattg
atggaacagcttaagcaagatggtattgtattaacgcatttagacttaggtggtggctta
ggggtaacttatatggacgaaaatccgcctcatccgagcgaatatgcaaaggcattgtta
gaaaaattgaaagattataaagatctcgaaattattcttgagccgggacgagcgatttcc
gctaacgcagggattttagtggcaaaagtgcaatacctcaaaagcaatgaaagccgtcat
tttgctatcactgataccggaatgaacgatatgattcgtcctgcgttgtatgaagcctat
atgaatattgtggaaattgaccgcactttagagcgcgaaaaagccgtttatgatgtggtc
ggccctgtgtgcgaaacttcggattttttgggtaaacaacgtgaattggcgattgccgaa
ggggattatattgcacaatgttccgccggtgcttatggcgcaagtatgtcttccaactat
aactcccgcccgcgtacggcagaagtattggtggacggtgataaagcccatttaatccgt
cgtcgcgaaagtttacaagaactttgggtgttggaatctgttgtttaa
DBGET
integrated database retrieval system