Rodentibacter abscessus: THUN1654_14100
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Entry
THUN1654_14100 CDS
T10998
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs00052
Galactose metabolism
rabs00511
Other glycan degradation
rabs00600
Sphingolipid metabolism
rabs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
THUN1654_14100
09103 Lipid metabolism
00600 Sphingolipid metabolism
THUN1654_14100
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
THUN1654_14100
Enzymes [BR:
rabs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
THUN1654_14100
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
BFU60573
LinkDB
All DBs
Position
complement(1658037..1661084)
Genome browser
AA seq
1015 aa
AA seq
DB search
MILPSYFENPEILQVNRQPHHAYFVPFAIDQKPDQLARETSRFFTALSGKNWDFSYYNSV
QDLPEAFLTRPLETQIPVPANWQNHGFDHHHYTNINYPFPFDPPFVPKENPCGHYRHQFD
FTPKSGKRYLLNFEGVDSCLFVYVNQQFVGYGQISHSTNEFDISENLRAGKNQLDVVVLK
WCDGSYLEDQDKFRMSGIFRDVYLLERESNYLQDFFIKTELNRDFTQATLNVETQFLGEK
QAIEFVLYDPQGNEITRKSAVDFSLDLPNPVLWNAENPQLYSLTLQTDNEVIEQKIGFRK
IYVENAVLKINGQGIKFKGVNRHDSDPKTGYAISPEQALIDLKLMKQHNINAIRTAHYPN
APWFSELCDLYGFYLISESDIESHGAAMQYVALPEQSIFLNEKRINQDEEIRRQTIDNFC
YFARSPNYKSAILDRTFANVERDKNRTSIVIWSLGNESGYGENFEAAAAWIKQRDTSRLV
HYESAIYQHQNHQNNLSNLDFYSEMYAPTQSLDSYNQSPAIKPYVLCEYSHAMGNSNGDA
EDYWQAFERNEKSCGGFVWEWCDHAPYLPDGSGKVGYGGDFGDTPNDGNFCMDGLVSQDR
IPHSNLLELKNVNRPVRAEFINHQVKIKNYWDFTDLKDNLHIRYAFIENGEIFEEGELEI
SCPPKNTVFLPLTIPSYRGRFLTLDLHYVNRKPSELLPKDHSLGFDQLIIYGQDLVRPQK
TSINLTALSAFEIEETNTHLYLTNNRFKFVLDKSKGIFTEIHKNGQAIIQQPLDFNIWRA
PTDNDRLIREFWQNAGYDNVFSRAYQVSWKPLGEQVQIDAEIGIVAVAKMRILQLSVCYL
LSKEGKLSIKINAKRPANLPYLPRFGLRFFLPKDCTQAQYFGYGEQESYIDKHHLARLGN
YVVEVSNYKMPYIKPQENGSHYGTHFVSLEDLMITADAPFSFNLSPYTQEEMTQKTHCYN
LQECTSTILCVDYKMSGIGSNSCGPVLKQQYRLSDTEFSCCFYIQICRDQTSCSW
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgattttaccgtcatattttgagaatcctgagattttacaggtcaatcgccagccccat
cacgcttattttgtaccctttgcaattgatcaaaaacctgatcagcttgcacgggaaacg
tcccgattttttaccgcactttcggggaaaaactgggattttagctattacaatagtgtg
caggatttacccgaagcgtttttaacccgtccgctagaaacgcaaattccggtacccgcc
aattggcaaaatcacggctttgatcatcatcactataccaatatcaattatcctttcccc
tttgatcccccttttgtgccaaaagaaaacccttgcgggcattatcgacatcaatttgat
ttcaccccaaaatcaggcaaacgttatttactaaactttgaaggggtagatagctgttta
tttgtttatgttaatcaacaatttgtcggttatgggcaaatcagccacagcacgaatgaa
tttgatattagcgagaatctccgtgccggtaaaaatcagcttgatgtggtggtattgaaa
tggtgtgacggcagttatttggaagatcaagataaattccgaatgtcgggtattttccgt
gatgtctatttgctggaacgtgagagtaattatttacaagatttctttattaaaaccgaa
ttaaaccgtgatttcacccaagcaacattaaatgttgaaacccaattcttaggtgaaaaa
caagcgatagaattcgtgctttatgatccccaaggtaatgaaataactcggaaaagtgcg
gttgatttttcacttgatttgccgaatccggttttatggaatgcggaaaacccacaactt
tatagcttaacattgcaaaccgacaatgaagtaattgaacaaaaaatcggttttcgaaaa
atttatgtggaaaatgccgtcttaaaaattaacggtcaagggataaaatttaaaggggta
aatcggcacgatagtgatcccaaaacaggctatgcgatttcgcccgagcaagcattgatc
gatctgaaattgatgaaacaacataatatcaatgccattcgtaccgctcattatcctaat
gcgccttggtttagtgaattatgcgatttatacggtttctatcttatctcggaaagcgat
attgaaagccacggtgcggcaatgcaatatgtcgccttgccggaacagagtattttctta
aatgaaaagcgcatcaaccaagatgaagaaattcgtcgacaaacaattgataacttctgt
tattttgcacgctcgccgaattataaatcggcaattttagaccgcacttttgcgaatgtg
gaacgcgataaaaatcgaacttccatcgtcatttggtcgcttggtaatgaaagtggttac
ggagaaaattttgaagctgccgccgcttggattaaacaacgtgatacaagtcgtttggtg
cattatgaaagtgcgatttatcaacaccaaaaccatcaaaataacctgagcaatcttgat
ttttacagtgagatgtatgcgccgacacaatccttggatagctacaatcaaagccccgca
attaaaccctatgtattgtgcgaatattctcacgcaatgggaaattctaatggcgatgcg
gaagactattggcaagcctttgaacgtaatgaaaaatcctgcggcgggtttgtatgggaa
tggtgtgatcacgccccttatttaccggatggatctggtaaagtgggttatggtggggat
ttcggtgacacgccgaatgatggcaatttctgtatggatggtttggtatcacaagatcgc
atacctcatagtaatttgctggaattaaaaaatgtgaatcgccccgtacgggcggaattt
attaatcatcaggtaaaaataaaaaactattgggatttcacggatcttaaagataatctc
catattcgatacgcctttatcgagaatggtgaaatctttgaagaaggtgaacttgagatt
tcttgtccgccgaaaaatactgtgtttttacctcttaccattccctcttatcggggaaga
tttttgacgttggatttacattatgtcaaccgaaaaccaagtgaactgctaccaaaagat
cattctttgggttttgatcaactgattatttacgggcaagatctcgttcgtccgcaaaaa
acatcgataaatctgaccgcactttcagcctttgaaatagaagagacgaacacgcattta
tatttaacaaacaaccgatttaaatttgttttagataaaagcaaaggcatttttactgaa
attcataaaaatggacaggcaataattcaacagccgttggatttcaatatatggcgtgcg
ccaacggataacgatcgcttgattcgggaattttggcaaaacgcgggttatgacaacgta
ttcagccgagcatatcaggtaagctggaaacctttgggagagcaggtacaaattgatgct
gaaatcggcattgttgccgtagcaaaaatgcgaattttgcagctttccgtatgttattta
ctttcaaaagagggaaaattgagcattaaaataaatgcaaaacgccccgctaatttacct
tatttaccacgcttcggcttacggtttttcttgcctaaagactgcacccaagcgcagtat
ttcggctatggtgaacaagaaagttatattgataaacatcatctcgctcggcttggcaat
tatgttgtggaggtatcaaattacaaaatgccatatatcaagccacaagaaaatggaagc
cattatggtacgcattttgtttcattagaagatttaatgattaccgcagatgcaccgttt
agttttaatctttcaccttatactcaagaggaaatgacgcaaaaaacgcattgttataat
ttacaggaatgtacttcaacgattctttgcgtggattataaaatgagcggtataggttct
aattcttgcggaccggtattgaagcagcaatatcgcctaagcgatacggaattttcttgt
tgtttttatatacagatttgtagagatcagaccagttgttcgtggtag
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