KEGG   Rodentibacter abscessus: THUN1654_15160
Entry
THUN1654_15160    CDS       T10998                                 
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
rabs  Rodentibacter abscessus
Pathway
rabs00330  Arginine and proline metabolism
rabs00480  Glutathione metabolism
rabs01100  Metabolic pathways
rabs01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:rabs00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    THUN1654_15160 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    THUN1654_15160 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    THUN1654_15160 (speF)
Enzymes [BR:rabs01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     THUN1654_15160 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase Aminotran_5 GKRP_SIS_2
Other DBs
NCBI-ProteinID: BFU60679
LinkDB
Position
1775288..1777450
AA seq 720 aa
MPNLKIAYSPTITKYFFTERDMVEITQTDFTDVGAIVLSSMDVAQFIKPIKATEFNIPVF
VVQTTEQPLSTEFYNSVYHIQDFNGYDIQLYSRQIETAARLYEEKMLPPFFKMLSEYVEM
GNIAFDCPGHQGGQYFRKHPAGRFLYDFYGENIFRSDICNADVKLGDLLIHEGAACDAQK
HAAQVFNADKTYFVLNGTSSANKVALNAILAPGDLVLFDRNNHKSNHHGALVQAGATPIY
LETARNPFGFIGGIDNHCFEESYLRALIKETAPESADKKRPFRLAVIQLGTYDGTIYNAR
QVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGFS
QASQIHKKDKHIKGQSRYVNHKRFNNAFMLHASTSPFYPLFATLDVNAKIQGSAAGRRLW
HDCVKVGIEARKLVLNNCELIRPFIPTTIKGKKWQDYDTEEIATNLEFFKFHPTDTWHKF
EGYEDEQYFVDPCKFLLTTPGISLETGEYESFGIPATILANYLRENGIIPEKCDLNSILF
LLTPAETLTKMQTLVAQIALFEKHIKQNSLLQDVLPTVYQNNEERYRGYTIRRLCQEMHD
LYVSRNVKQLQKDLFRKATLPEYAMNPRDANIELIRNNVELVSLTDIVGRIAAEGALPYP
PGVLCVVPGEKWSTTAQQYFLALEEGINTLPGFAPEIQGVYLQKDPDGRTRAYGYVLNEH
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgcctaatttaaaaattgcatatagtccgacaatcactaaatatttctttacggaaaga
gatatggtggaaatcacacaaacagatttcactgacgttggtgctatcgtattaagttca
atggacgttgctcagtttattaaaccaattaaagcaacagaatttaatatacctgttttt
gttgtccagacgaccgaacagccactttcaactgaattttataattcggtttaccatatc
caagattttaatggttatgatattcaactttatagccgccaaattgaaaccgcagccaga
ctttacgaagaaaaaatgcttccacctttcttcaaaatgcttagcgaatacgtggaaatg
gggaacattgctttcgactgtccggggcaccaaggcggtcaatatttccgtaaacatccg
gcaggtcgcttcctttatgacttctacggagaaaatattttccgttcggatatttgtaat
gctgatgtgaaattgggtgatttactcattcacgaaggcgcggcttgtgatgcacaaaag
catgcggcacaagtgtttaatgcggataaaacttattttgtattaaatggtacatcatct
gcaaataaagtggcattgaatgcaattttagcgccgggtgatcttgttttattcgatcgc
aacaatcataaatcgaaccaccacggtgcattagttcaagccggagcaacacctatttat
ctcgaaacggcacgtaatccgtttgggtttatcggtggtattgataaccattgttttgag
gaaagttatttaagagctttaattaaagaaaccgcacctgaaagcgcagataaaaaacgc
ccgttccgtttagcggttattcaattgggaacttacgatggtacgatctataacgctcgt
caagtcgtggataaaatcggtcatctttgtgattacattttatttgattccgcttgggta
ggttacgaacagtttattccaatgatgaaagattgttctccgctcttgctggaactaaat
gaaaacgatcccggtattatcgtgacacaatccgttcacaaacaacaagccggtttctca
caagcttctcaaattcacaaaaaagacaagcatatcaagggtcaaagccgctatgtcaac
cataaacgctttaacaatgcctttatgctacacgcatcaaccagtccgttctacccacta
tttgcaacgcttgatgtgaatgcaaaaatccaaggtagcgcagccggtcgccgtttatgg
catgactgtgtaaaagtagggattgaagcccgcaagcttgttttgaataattgtgaactt
attcgtccgtttattccgacaacgataaaaggtaaaaaatggcaagattacgatacggaa
gaaatcgccacaaaccttgaatttttcaaattccatccaaccgatacatggcataaattt
gaaggctatgaagacgaacaatacttcgttgatccttgcaaattcttactaaccacaccg
ggcattagcttggaaaccggcgaatatgagtctttcggtattccagccaccatcttagcc
aactatttgcgtgaaaacggtattattccggaaaaatgcgatttgaactccatcctattt
ttgttaacgcctgctgaaaccttaacaaaaatgcaaaccttagtcgcccaaatcgcattg
tttgagaaacatatcaaacaaaattccctattacaagacgtattaccaacggtttaccaa
aataacgaagaacgttacagaggttataccattcgccgattatgtcaggaaatgcatgat
ctttatgtaagtcgaaatgtaaaacaattacaaaaagatttattccgtaaagcaacctta
ccagaatatgcgatgaatcctcgcgatgccaatattgagctaattcgtaacaatgtggaa
ttagtctcactaacagacatcgtgggcagaattgcagctgaaggtgcgcttccttatcct
ccgggcgttttatgtgtcgtaccgggagaaaaatggagtaccaccgctcaacaatatttc
ttagcgctagaagaagggattaataccttacccggttttgcaccggaaatccaaggggtc
tatttacaaaaagatcctgacggacgaacccgcgcatacggttatgtattaaatgaacat
taa

DBGET integrated database retrieval system