Rodentibacter abscessus: THUN1654_18860
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Entry
THUN1654_18860 CDS
T10998
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs03030
DNA replication
rabs03410
Base excision repair
rabs03420
Nucleotide excision repair
rabs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THUN1654_18860 (polA)
03410 Base excision repair
THUN1654_18860 (polA)
03420 Nucleotide excision repair
THUN1654_18860 (polA)
03440 Homologous recombination
THUN1654_18860 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rabs03032
]
THUN1654_18860 (polA)
03400 DNA repair and recombination proteins [BR:
rabs03400
]
THUN1654_18860 (polA)
Enzymes [BR:
rabs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THUN1654_18860 (polA)
DNA replication proteins [BR:
rabs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THUN1654_18860 (polA)
DNA repair and recombination proteins [BR:
rabs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THUN1654_18860 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THUN1654_18860 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_GTF3C1_N
Motif
Other DBs
NCBI-ProteinID:
BFU61049
LinkDB
All DBs
Position
complement(2153929..2156721)
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIAANPLVLVDGSSYLYRAFHAFPPLTNSVGEPTGAMYGVLNMLKSLISQVQPSHIAV
VFDAKGKTFRDEIFEQYKSHRPPMPDDLRKQIQPLHDIIRALGIPLLVVEGVEADDVIGT
LAVQASQVGKKVLISTGDKDMAQLVDDNIMLINTMNNSLLDREAVIEKYGIPPELIIDYL
ALMGDSVDNIPGVAGVGEKTALGLLQGIGNMAEIYANLEKVADLPIRGAKKLGEKLFAQK
TMADLSYTLATIKTDVELDITPEELLLGESQNDQLTEYFARYEFKRWLNEVMNGKDSITK
SSEQPVKINAYQATSATTSAVENLPEIQIDRSRYETLLTEADLHRWVEKLSQANLIALDT
ETDSLDYMSANLVGLSFALENGEAAYLPLQLDYLGAPKTLEKTTALSALKPILENTDIKK
VGQNIKYDLTILARNGIEVQGVAFDTMLESYVLNSTGRHNMDDLAKRYLGHQTIRFEDIA
GKGKNQLTFNQIPLEQSAEYAAEDADVTMKLQQALWTKLQEEPSLVTLFEEMELPLLSVL
SRMERTGVLIDSDALFMQSKEIAARLTALEEQAYELAGQKFNLASPKQLQEILFDTLGLP
ILQKTPKGAPSTNEEVLEELAYSHELPKMLVEHRGLSKLKSTYTDKLPQMVNAQTGRVHT
SYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFIAREGYSVMAADYSQIELRIMAHL
SNDQGLIQAFAQGKDIHRATAAEIFGIPQDEVTSEQRRNAKAINFGLIYGMSAFGLSRQL
GIPRSDAQKYMDLYFQRYPGVQHFMNDIREKAKAQGYVETLFGRRLYLPEINSNNSMRRK
GAERVAINAPMQGTAADIIKRAMIKLDEFVRNDPDIEMIMQVHDELVFEVRSEKVEFFRP
LIKQYMETAANLVVPLIVEVGVGKNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaatcgcagcaaacccgctggtattagtggatggctcttcttatttataccgc
gcatttcacgcatttcctccgttaaccaattcggtgggagaacctaccggtgcgatgtac
ggtgtgttaaatatgctcaaaagcctgatctcacaggtacaacccagccatattgccgtc
gtatttgatgccaaagggaaaacgtttcgtgatgaaatatttgaacaatataaatctcac
cgtccaccgatgcccgatgatctgcgtaaacaaatacaacctttacacgatattatccgc
gcactcggcattccgcttttagtcgtagaaggcgtggaagcggacgatgttatcggcacg
cttgccgtgcaagcctcacaagtcggcaaaaaagtgctgattagcaccggtgataaagat
atggctcagttagtcgatgataacattatgcttatcaacacgatgaataacagcttactt
gatcgtgaagccgtaatcgaaaaatacggcattccaccggaactcattattgattacctt
gcgctgatgggcgatagcgttgataacattccgggggttgcaggcgtaggtgaaaaaacc
gcattgggacttttacagggtatcggcaatatggcggaaatttatgccaatcttgaaaaa
gtggcggatttacccatccgcggagcgaaaaaattaggcgaaaaattatttgcccaaaaa
acgatggcggacttgtcttacacccttgccaccattaaaaccgatgtggaactcgatatt
acaccggaagaattgttgctcggtgaaagccaaaatgatcaactcaccgaatatttcgcc
cgctatgaatttaagcgttggttaaacgaagtgatgaacgggaaagattctatcacgaaa
agctcggagcaaccggtaaaaattaatgcctatcaagctacctcggcaacgacaagtgcg
gttgaaaatttacctgaaattcaaattgatcgcagccgatacgaaaccttactcaccgaa
gcggatcttcaccgctgggttgaaaaactttcacaagccaaccttattgctttggatacg
gaaaccgatagtctggattatatgtcggcaaacttagtcgggctttcttttgccttagaa
aatggcgaagccgcttatttaccgctacaattagattatctcggcgcaccgaaaacgtta
gaaaaaacaaccgcactttcagccttaaaaccgattttggaaaataccgacatcaaaaaa
gtggggcaaaatatcaaatacgatctcactattttggcgcgtaacggtattgaagtacaa
ggtgtagcatttgatacgatgcttgaatcttacgtgctaaatagcacaggtcgccacaat
atggatgatcttgccaaacgctatttagggcatcaaactattcggtttgaagacatcgcc
ggcaaaggtaaaaatcagcttacgttcaatcaaattccattagaacaatccgccgaatat
gcagctgaagatgcggatgtcacaatgaaattacaacaggctttatggacaaaattacaa
gaagaaccaagccttgtaactctctttgaagaaatggaattaccattattaagcgtgctt
tcccgtatggaacgcaccggcgtgttgattgacagtgatgcactctttatgcaatctaaa
gaaattgccgccagattgaccgcacttgaagaacaagcctacgaactggcgggacaaaaa
tttaatcttgcttcccccaaacagttacaagaaattctatttgatactctcggcttaccg
atactgcaaaaaacccctaaaggtgcgccctcaaccaatgaagaagtattagaagaactc
gcttacagccatgaattaccaaaaatgctggtagagcatcgaggcttgagcaagttaaaa
tccacctacaccgataaacttccgcaaatggtaaatgcacaaaccgggcgtgtgcatact
tcgtatcatcaggcggtaaccgcaacaggacgtttgtcttccagtgatccgaacttgcag
aacattccgattcgtaatgaggaaggtcgccgcattcgccaagcctttattgcccgtgag
ggatattccgttatggcggcagattactcccaaatcgaattacgcattatggcgcatttg
tcgaacgaccaaggtctcattcaagcctttgcccaaggcaaagatattcaccgagcgact
gccgcagaaatcttcggaatacctcaagatgaagtaacgagtgaacaacgccgtaacgca
aaagctattaacttcggtttgatttacggtatgtccgcattcggactttctcgccagctt
ggaattccacgttcggatgcacaaaaatatatggatttatatttccaacgctacccgggc
gtgcaacactttatgaatgacatccgcgaaaaagccaaagcacagggatatgtggaaacc
ttattcggtcgccgtttgtacttaccggagattaattccaataacagtatgcgccgtaaa
ggcgcggaacgtgtggcaattaatgcgccaatgcagggaaccgctgcggatattatcaaa
cgggcgatgattaaattagacgaatttgtacgcaatgatcccgatattgaaatgattatg
caggtacatgatgaattagtatttgaagtgcggtcggaaaaagtcgagtttttccgtccg
ctaattaagcaatatatggaaactgccgccaatcttgtcgttccattaattgtagaagtg
ggcgtgggcaaaaattgggatgaagcccattaa
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