Rodentibacter abscessus: THUN1654_20110
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Entry
THUN1654_20110 CDS
T10998
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs00550
Peptidoglycan biosynthesis
rabs01100
Metabolic pathways
rabs01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
THUN1654_20110 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
THUN1654_20110 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rabs01011
]
THUN1654_20110 (mrdA)
Enzymes [BR:
rabs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
THUN1654_20110 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rabs01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
THUN1654_20110 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BFU61174
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All DBs
Position
2295780..2297732
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AA seq
650 aa
AA seq
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MNLKKFFAAPTHEPIRDKKAERNLFTRRTLVAFIGIIAVTGVLFANIYHLQIVNFDTYQT
RSNGNRIKLLPVPPTRGLIYDRYGELLAENLTFFGLYIVPEKTENLDRTFDELRYIVGLT
DEDIKQFKKERRRGMRYTSIMLKSNLTEEQIARFSVNQYQFPSLEIRPYFKRNYLYGEVM
THILGYVGKINDKDVERLKKEEKFANYAGSHDMGKLGIERYYEDQLHGSTGFEEVEINNR
GKVIRKLREQPAKAGKSIHLTIDLALQRYVTDLLAGQKGAVVVLDPKDSSVLAMVSTPSY
DNNLFVEGISNTDYKRLLEDPDRPLYSRATQGVYPPASTVKPFIAVAAQTENVVNQKTTI
FDPGYWMLPNTTKRFRDWKKSGHGYTDLNKAITESSDTYFYQVAYNLGIDRLSDWMKRFG
FGMPTGIEINEEASANMPTRSWKQKRYKRQWVQGDTISVGIGQGYWTATPLQVAKATAIL
VNNGKVNTPHLMKSVEGVTIEPYQDPLLYEDITEPKQAYWEAAKRGMFNVVHSAAGTGRK
AFIGANYHVAGKSGTAQVFSLKENQKYDATGLKKELHDHAWFAAYAPYENPKMVVSIILE
NAGGGSSNAAPVVRKIMDYYLNERLPELEKRADMQSNKSIEMQIENGQTE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaagaaattttttgcagcgcccactcacgaaccgattcgcgataaaaaagcg
gagcggaatctttttacccgccgaacattagttgcgtttatcggtatcatagctgttacc
ggtgtattgtttgccaatatttatcatcttcaaatcgttaatttcgatacttatcaaacc
cgttccaacggtaatcgaatcaaactcttgcccgtaccgccgacccgtgggcttatttat
gatcgttatggcgaattattggcggaaaatcttaccttcttcgggttatatatcgtaccg
gaaaaaacggagaatttagaccgcacttttgacgagcttcgctacattgtcggtttgacg
gatgaagatattaaacaatttaaaaaagaacgccgccgtggtatgcgttatacctcgatt
atgctcaaatcaaatttgacggaggaacaaattgcacgtttttccgtaaaccagtaccaa
tttccaagcttggaaattcgcccttattttaagcgtaattatttatacggcgaggtaatg
acacatattctcggctatgtgggcaagattaacgataaggatgtggaaaggctcaaaaaa
gaagagaaatttgcgaactatgccggctctcatgatatggggaaactcggtatcgagcgt
tattatgaagatcagcttcatggcagcacggggtttgaagaagtcgaaattaataaccgt
ggtaaggtgattcgtaaattacgtgaacaacctgcaaaagccgggaaaagtattcatttg
accatcgatctcgcccttcaacgttatgttaccgatttacttgccggacaaaagggggcg
gttgttgttttagatcccaaagatagcagcgtgttagcgatggtttctacgccaagttat
gataataatctttttgtggaaggtatttccaacacagattataagcgtttgttagaagat
cctgaccgaccgctttatagtcgtgccacacaaggtgtttaccctcctgcatctacggtg
aaaccttttatcgcagttgcggcacaaacagaaaatgtggttaatcaaaagacgacgatt
tttgatccgggttattggatgctgccgaatacgacaaaacgtttccgagattggaaaaaa
tcaggccatggttatactgatctcaataaagcgattacggaatcttcggatacctatttt
tatcaagttgcctataatttgggcattgatcgtttatcggattggatgaaacgtttcggt
ttcggtatgccgacaggaatcgaaattaatgaagaagcctccgccaatatgccgaccaga
tcttggaaacaaaaacgctataaacgccaatgggtgcagggcgatacgatttctgtcggt
atcgggcaaggctattggacggcaacgccgttacaggtggcaaaagcaacggcgatttta
gtcaataatggcaaagtgaatacgccgcatttaatgaaatcggtggaaggtgtgactatt
gagccttatcaagatccgctactttatgaggatattaccgaacctaaacaggcttattgg
gaggcagccaaacgaggaatgtttaacgtggtgcattccgctgcagggacagggcgtaag
gcttttatcggggcaaattatcacgttgcgggaaaatccggtacggcgcaagtatttagt
ttaaaagaaaaccaaaaatatgatgcgacaggattgaaaaaagaattacacgatcacgct
tggtttgctgcctatgcgccttatgaaaatcctaaaatggtcgtatcgattattttggaa
aatgccggtggcggttcaagtaatgcggcaccggtggttcgtaaaattatggattattat
cttaacgaacggttaccggaactggagaaaagagcagatatgcaaagcaataagtccatt
gaaatgcagatagaaaacggacaaacagaataa
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