Rhodoferax antarcticus: RA876_00135
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Entry
RA876_00135 CDS
T04655
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
rac
Rhodoferax antarcticus
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rac03000
]
RA876_00135
Transcription factors [BR:
rac03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RA876_00135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
Motif
Other DBs
NCBI-ProteinID:
APW45042
LinkDB
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Position
complement(26590..27549)
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AA seq
319 aa
AA seq
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MQVNTRAALGQLSDMDIRLLRVFKTVADCGGMTAAELELNIGTSTVSRHIKDLETRLGLS
LCRRGRAGFALTPEGEQIYAETLQLLAGVDAFRSRVDEIHQRMGGELHLAVFDKTASNPQ
AHIGEAIALFAAQAPGVSLHLHVAPLNVIERGVLDGQFQMGIIPGHRASTALAYDELFTE
KMFLYCGQAHPLFVASAAQEPADWRALDPYPFAGLGYHSPNMELTQQVRLSRQATGYDQE
SIATLILSGRFLGFLPDHYAADFVQRARMRALRSQVFGYQCSFFGILRASPQPARVTLAL
QACLRQAHAMNAPTGSATN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaacacccgtgctgcgctgggtcagttgagtgacatggacatccgcttgctg
cgggtgtttaaaaccgtggccgactgtggcggcatgacagccgccgagctagagctcaac
attggcaccagcacggtgagtcgccatatcaaggacctggaaacccgcttgggcctgagc
ttgtgccggcgtggccgcgccggttttgccctcacgcccgagggcgagcagatttacgcc
gagacgctgcagctgctggccggggtggacgcgtttcgcagccgggtggatgaaatccac
cagcgcatgggcggtgagctgcacctggcggtgtttgacaagaccgccagcaatccgcaa
gcgcacattggcgaggcgattgcgctgtttgctgcgcaggcgccaggcgtgagcctgcac
ctgcatgtggcgccgctgaacgtgatcgagcgcggcgtgctggacgggcagtttcagatg
ggcatcatccccggccaccgcgcctcgaccgcgctggcctatgacgagctgtttactgaa
aagatgtttttgtactgcggccaggcacacccgctgtttgtagccagcgcggcacaggag
cccgccgactggcgcgccttggacccgtacccgtttgccgggctgggttaccactcgccg
aatatggagctcacccagcaagtgcgcctgagccgccaggccaccggttacgaccaggag
tcaattgccacgttgatcctgtccgggcgctttttgggttttttgccggaccactacgcc
gcagactttgtgcagcgcgctcgcatgcgggcgctgcgttcgcaggtgtttggttatcag
tgcagcttttttggcattttgcgggcctcgccgcagcccgcgcgggtgacgctggcgcta
caggcctgcctgcgccaggcacatgccatgaatgcaccgaccgggagtgcaacaaactga
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