Rhodoferax antarcticus: RA876_00670
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Entry
RA876_00670 CDS
T04655
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
rac
Rhodoferax antarcticus
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rac03000
]
RA876_00670
Transcription factors [BR:
rac03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RA876_00670
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_24
Motif
Other DBs
NCBI-ProteinID:
APW45133
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Position
143977..144852
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AA seq
291 aa
AA seq
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MSQSFNYRHLYYFWIVAKEGGMARAAERLDMALPTISTQVRELEKSLGVSLLKAQGRNLV
LTEAGVATMREADQIFALGEGLPQRVREAVSGARIRFNVGISDGIAKLAVHRLLAPVLGE
PKLRLLCHEGEFEQLLAELALHKLDAMLSDRPAPAKSELHITSQLLSSSQIAWYAPKNWA
DAARNNYPHSLAAVPLLLPTRHSAVRLRIDHWFERERIQPMVVGEFEDSALLMTFGAAGM
GVFPATESINDELLETHKLDNIAVCSEVQEEFHLIFTARKVLHPLLLRLLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagcttcaactaccgtcacctgtactatttctggatcgttgccaaagagggc
ggcatggcccgcgccgccgaacggctggacatggcgctgcccaccatcagcacccaggtg
cgggagctggagaagtcgcttggggtcagtctgctcaaggcgcaagggcgcaacctggtg
ctgacagaagcgggggtcgccaccatgcgcgaggcggatcagatctttgccctgggtgaa
gggctgccccagcgggtgcgcgaggccgtcagtggcgcccggattcgctttaatgtcggc
atctcggacggcattgccaagctggcggtgcaccgcctgctggcaccggttctgggtgag
cccaagctgcgcctgctctgccatgagggcgagtttgaacaactgctggccgagctggcc
ttgcacaaactcgatgccatgctgtccgaccggcccgcacccgcgaagagcgaactgcac
atcaccagccaattgctctccagcagccagatcgcttggtacgcgccaaaaaattgggca
gacgcggcccgcaacaactacccgcacagcttggccgcggtgcccttgttattgcccacg
cggcattcggcggtgcgcttgcgcattgaccattggtttgaacgcgagcgcatccaaccc
atggtcgtcggtgagtttgaagacagcgcgctgttgatgaccttcggtgccgctggcatg
ggagtttttccggccaccgaatcgatcaacgacgagttgctggaaacacacaagctggac
aacatagccgtctgcagcgaggtgcaagaggagtttcacctgatcttcacagcgcgcaaa
gtgctgcatccgctgttgttgcgactgcttggttga
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