Rhodoferax antarcticus: RA876_02280
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Entry
RA876_02280 CDS
T04655
Name
(GenBank) helicase SNF2
Organism
rac
Rhodoferax antarcticus
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
APW48152
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Position
complement(471496..474888)
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AA seq
1130 aa
AA seq
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MALYRSQKVLTLTITPDQNRWLLEGAVQGSQREPYQVEVDLKRGINGQVLDWDSDCTCPA
GYQCKHAVALLIKAAYKGQVLLGHSTASVPTTPATPEQLEARRLAELARQQAAEQLEADN
QVVRWLNELARTAPRPADALPPQSAPSRPGTAAARPEQFLYLLSILNPQGPNPQLSLEVV
TSYPKVTGGWAKAKQLKHQPERGQPLFDLASEADHDVLQLIRAMPGSSIQYYYSYSARSK
ITPEGKYGVQILEKAASTGRLFVLTPPSQPGTPVEWGPPLALQWEWHEVSASINAKSGWA
LRAKLGDDQAKICLNNPTLYLDAVNGRCGLVDVQGMSSGQIAVLLKTPPLKSEALKNHQP
DLIAHLGAVPLPPVLEPLPTLKGITPKACLLLQAVPPERMPDDGLMLMRLSFDYNGHRGW
WVGQGTTVLVEGPSGRAMLQRDPQTELEAIVRLRDWGFASSGRDVFGVPGDASQHIWLQL
ADTDYASLREAGFEVTLDDTLVNWISHASALNVNLQAQGDDEATSPWFDLSLGMEINGQR
HNILPLLPSLISTAAMSPRDAVTGLPDLPPFVYLPNPQGGFIRLPTDNLKPWLGALLELV
GDRDHDFSGESLNLSRLDAMRTTAALGEGAVWEGAQHLREMVQKLKCNTELPEVPLPASV
HATLRPYQQQGVNWLQFLREYGLAGILADDMGLGKTLQTLAHIQIEKDAGRLTAPALIIA
PVSLMGNWRREAERFCPDLRCLVIHGADRHEVSGSTHAHDIVIAPYSLLPRDREGWLQGQ
WHLVVLDEAQNIKNANTFAAEVASELKARHRLCLSGTPMENHLGEIWSLFHFLMPGFLGS
QKRFTELFRKPIEKQGDPEALQQLRARVTPFMLRRTKALVANELPPKIETVMRVELTGKQ
ADLYETIRLGMEKTVREALSTKGLAKSQITILDALLKLRQVCCDPHLLKLDAAKKVKTSA
KLEQLMALLPEMLSEGRRILLFSQFTSMLTLIEAELAKRKLTWVKLTGQSQKRDDLIEQF
TSGKVPLFLISLKAGGVGLNLPQADTVIHYDPWWNPAVQAQATDRAHRIGQTQSVWVVKL
VAQGTIEERILALQERKAALAESMYSGSVGRKQPLFTESDLAELLKPLST
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
ctggcgctgtaccgcagtcaaaaagtcctgaccttgacgatcacgcccgaccagaaccgc
tggctgctggaaggcgcggtgcagggcagccaacgtgagccctaccaggtcgaggtcgac
ctcaagcgcggcatcaacgggcaggtactggactgggacagcgactgcacctgcccggcg
ggctaccagtgcaaacacgcggtggcgctgctgatcaaggccgcctacaaaggccaagtc
ctgctggggcacagcaccgccagcgtaccgaccacgcccgccaccccggagcaactcgaa
gcccgccgcctggccgaactggcgcgccagcaagccgccgagcagttggaagccgacaac
caggtggtgcgctggctcaacgaactggcccgcaccgccccccggccagcggatgcgctg
ccgccgcaaagcgccccaagccgacccggcaccgcagcagcgcggcccgagcagtttttg
tacctgctgtccatcctgaacccgcaaggccccaacccgcaactcagcctggaggtggtt
acctcctaccccaaggtcactggcggctgggccaaggccaagcagctcaagcaccagccc
gagcgcggccagcccctgtttgacctggccagcgaggccgaccacgatgtgctgcagctc
attcgcgccatgccgggcagctccatccagtattactacagctacagcgcgcgcagcaag
atcacgcccgagggcaaatacggcgtgcagattctggaaaaagccgctagcaccgggcgg
ctttttgtgctgaccccacccagccagcctggcacacccgttgaatgggggccaccgctg
gccctgcaatgggagtggcatgaagtcagcgctagcatcaacgccaaatccggttgggcg
ttgcgtgccaaactgggtgatgaccaagccaaaatttgcctgaacaacccgactctgtac
ttggatgctgtcaacgggcgctgcggcctggtcgacgtgcaaggcatgagctctggccag
attgccgtgctgctaaaaaccccaccgctcaagtcagaagcactcaaaaatcaccagccc
gacctgattgcgcacctcggtgcggtaccgctaccgccggtgctggagccattgcccacc
ctcaaaggcatcacgcccaaagcctgcctgctgcttcaagccgtgccgccagaacgcatg
ccagacgacggcctgatgctgatgcgcctgagctttgactacaacggccaccgtggctgg
tgggtgggccagggcaccaccgtgctggtggaaggccccagtggccgggccatgctgcag
cgcgacccgcaaaccgagctggaagccatcgtgcgcctgcgcgactggggctttgccagc
agcgggcgcgatgtgtttggcgtgcccggtgatgcgtcacagcacatctggctgcaactg
gccgacaccgattacgcgtcgctgcgtgaagccgggtttgaggtgacgctggacgacacg
ctggtcaactggatcagccacgccagcgccttgaacgtcaacctgcaagcgcagggcgac
gacgaagccacctcgccgtggtttgacctgtcgctgggcatggaaatcaacggccagcgt
cacaacatcctgccgctgctgcccagcctgatcagcaccgccgccatgagcccgcgcgat
gcggtcaccggcctgcctgacctgccgccatttgtctacctgccgaatccgcaaggcggc
ttcatccgcctgcccaccgacaacctgaaaccctggctgggcgcgttactcgaattggtg
ggcgaccgcgaccacgacttttctggcgagagcttgaatctctcgcgcctggacgccatg
cgcaccaccgccgctttaggcgaaggcgccgtgtgggaaggtgcccagcacctgcgtgag
atggtgcaaaagctaaagtgcaacaccgagctgcccgaagtgccgctgcccgccagcgtg
cacgccacgctgcgcccctaccagcagcagggcgtgaactggctgcagtttctgcgcgaa
tacggcctggccggcatcctggctgacgacatgggcctgggcaaaaccctgcaaacgctg
gcgcacatccagatcgaaaaagacgccggccgcctcaccgcgcctgcgctgatcattgcg
ccagtgagcctgatgggcaactggcgccgagaggccgagcgcttttgcccggacctgcgc
tgcctggtcatccacggcgcggaccggcatgaggtcagcggcagcacgcacgcgcacgac
atcgtcatcgccccgtattcgctgctgccgcgtgaccgcgaaggctggttgcaaggccaa
tggcatctggtggtgctggacgaagcgcaaaacatcaaaaacgccaacaccttcgccgct
gaagtagccagcgagctgaaagcccgccatcgcctgtgcctctcaggcacgcccatggaa
aaccacctgggtgaaatctggagcctgttccactttttgatgcctggctttctgggcagc
caaaaacgctttaccgaactgtttcgcaaacccatcgaaaagcagggcgaccccgaagcg
ctgcagcagctgcgcgcgcgtgttaccccgttcatgctgcgccgcaccaaggcgcttgtg
gccaatgagctgccgcccaaaatcgagacggtgatgcgcgtggagctgaccggcaaacaa
gctgatctgtacgaaaccatccgcctgggcatggaaaaaaccgtgcgcgaagcgctcagc
accaaaggcttggccaagtcacagatcaccattctggacgccctgctgaaactgcgccaa
gtctgctgcgacccgcatttgcttaaattggacgccgcgaaaaaagtcaaaacctcggcc
aagctggagcaactgatggcgctgctgcccgagatgctcagcgagggccggcgcattttg
ctgttttcgcagttcaccagcatgttgacgctgatcgaggccgaactggccaaacgcaag
ctgacctgggtcaaactcaccggtcagagccagaagcgcgacgacctgattgagcagttc
accagcggcaaggtgccgctgtttctgatcagcctgaaagccggtggcgtcggcctgaac
ttgccacaggccgacacggtgattcactacgacccctggtggaacccggcggtgcaagcc
caagccaccgaccgcgctcaccgcatcggccagacgcaaagcgtgtgggtggtgaaactg
gtggcgcaaggcacgattgaggaacgcattctggcgctgcaagagcgcaaagccgcgctg
gctgagagcatgtacagcggctcggtcgggcgcaaacagccgctgtttaccgagagcgat
ctggcggagttgctgaagcctttgtcgacctga
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