Rhodoferax antarcticus: RA876_02605
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Entry
RA876_02605 CDS
T04655
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
rac
Rhodoferax antarcticus
Pathway
rac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA876_02605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rac03000
]
RA876_02605
Transcription factors [BR:
rac03000
]
Prokaryotic type
Helix-turn-helix
Other families
RA876_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
AAA_16
GAF_3
AAA_3
DUF815
AAA_7
AAA_22
nSTAND3
bpMoxR
Parvo_NS1
Glyco_transf_4
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
APW45444
LinkDB
All DBs
Position
533520..535199
Genome browser
AA seq
559 aa
AA seq
DB search
MVNTQVFESQRELNAIYEVSKTLAMSLDVSKTFREALNYLSHAYDWRRAFVVLGETEGSL
QGLCAVGLTKEEQQRLRFQSGEGIVGRVYANGIQVMVPNVHTEPLFLNRTGGADQTPDVP
IAMLVTPISADRRTVGVLAVDCLNPGEAHSFSNDLRLLKMVATLMGQALLLHRSVSAAHD
SLQDAVRRMSKALKPVHQIDQVVGVSKPMQQVFEQVHQVAPSRTTVLLRGESGTGKEVIA
RALHNLSPRKREAFVRVNCAALTESLLESELFGHEKGAFTGAQGQRKGRFELSHGGTLFL
DEIGDISPSFQAKLLRVLQEREFERVGGTASVKVDVRLILATNRNLERMVQAGEFRADLY
YRINVVSIQLPPLRQRREDIPAMANLFLERFNKENGRTTHFSPAAMRVLTSCYWPGNVRE
LENCVERTATMAHDDVIGNLAFPCQGNGCLTQVLHHIDRVDAVSPGRMIEIPVVQGPVPP
RAVPEPEVDDSPEAQAPAPASEPAPPADTDGKPEGERERLIWAMERCGWVQAKAARLLKI
SPRQMGYALQKNDIEVRKF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacacacaagtttttgagtcgcagcgtgaattgaacgccatttacgaggtcagc
aaaacgctggccatgtcgctggacgtttccaagacctttcgcgaagcgctgaactatctg
tcgcatgcctatgactggcgccgcgcctttgtggtgctgggcgaaacagaaggcagcttg
caggggctgtgcgccgtggggctcacaaaggaggagcagcagcgcctgcgtttccagtct
ggcgaaggcatcgtcgggcgcgtctatgccaatggcatccaggtgatggtgcccaacgtg
cacaccgagccgctgtttctgaaccgtaccggtggtgccgaccagaccccagacgtcccc
attgcgatgctggtgaccccgatcagcgctgaccgccgtaccgtgggtgtgctggcggtg
gactgcctgaacccaggtgaggcgcacagcttctcgaatgatctgcggctgctcaaaatg
gtcgccaccctgatggggcaggcgctgctgctgcaccgcagcgtcagcgccgcgcacgac
tcgctgcaagacgcggtgcgccgaatgagcaaggcgctcaagcccgttcaccagatcgac
caggtggtaggtgtttcaaaaccgatgcagcaggtgtttgagcaggttcaccaggtggca
ccgtcacgcaccacggtgctgttgcgtggtgaaagcggcaccggcaaagaggtaattgcc
cgtgcgctacacaacctgtcgccacgcaagcgcgaagcctttgtgcgtgtcaattgcgcc
gcgctgaccgagtcgctgctggaaagcgaattgttcggccacgagaaaggtgcgttcacc
ggcgcgcagggccagcgcaaggggcgttttgagctgtcacacggtggcaccctgtttctg
gacgaaatcggtgacatttcgccatcgtttcaggccaagctgctgcgtgtgttgcaagag
cgcgagtttgagcgcgtgggtggcacggccagcgtgaaggtggatgtgcggctgattctg
gccaccaaccgcaacctggagcgcatggtgcaggccggtgaattccgcgccgacctgtat
taccgcatcaacgtggtgagcatccagctgccgccgttgcgccagcgccgcgaagacatt
ccggccatggccaatctgtttctggagcgctttaacaaggaaaacggccgcaccacccat
ttcagccccgctgccatgcgggtgctgaccagctgctactggcctggcaatgtgcgtgag
ctggaaaactgtgtagagcgcactgccaccatggcgcatgacgacgtcatcggcaacctg
gctttcccctgccagggcaacggctgcctgacccaggtgctgcaccatatcgaccgggtg
gatgcggtcagccctgggcgcatgatcgagatcccggtggtgcaaggcccggtgccgcca
cgtgctgtacctgaacccgaggtggatgacagcccagaagcccaagcgccagcacccgcc
agtgaaccagcgccgcccgccgacaccgacggcaagcccgaaggcgagcgtgaacgcctg
atctgggccatggagcgctgcggctgggtgcaggccaaagccgcacgcctgctgaaaatt
tcaccacggcaaatgggttacgccttgcaaaaaaacgacattgaggtgcgaaagttttga
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