Rhodoferax antarcticus: RA876_02800
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Entry
RA876_02800 CDS
T04655
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00550
Peptidoglycan biosynthesis
rac01100
Metabolic pathways
rac01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA876_02800
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RA876_02800
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rac01003
]
RA876_02800
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rac01011
]
RA876_02800
Enzymes [BR:
rac01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RA876_02800
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RA876_02800
Glycosyltransferases [BR:
rac01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RA876_02800
Peptidoglycan biosynthesis and degradation proteins [BR:
rac01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RA876_02800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
EF_EFCAB10_C
DUF6907
Motif
Other DBs
NCBI-ProteinID:
APW45477
LinkDB
All DBs
Position
566407..568665
Genome browser
AA seq
752 aa
AA seq
DB search
MKPILSARLLQLLLLCALCWPMAFAATPLDLPSLESLTDYRPKIPLRVYTSDKVLIGEFG
QERRDFVAIKDIPLIQRQALLAIEDSRFYEHGGVDYKGVVRAVLADLSGGLKQGASTITM
QLARNFFLTREKLFSRKLTEVMLAYKIERELSKDQILELYMNQIYLGQRAYGFSSAARIY
FGKPLKDLSLGQAAMLAGLPQAPSGINPIVNPIRARARQKLVLKRMLALGYITDAQYKAA
LKENLGVLAEGQSVGNHAQYVAEMVRQVIYAQFKDEAYTRGINVTTTLVNADQQAAYDAL
RRQVLAYDQRHGYRGPEAHVVLPANAAEREKLIETTLQQHPASDTLLSAMVLSAKPASVQ
AVLVDGDKIELQADGLRWAAAALASKASAALKIKPGAVIRVVKNSRGRWSIAQLPVVGAA
FVALNNQTGAYRALVGGFDFNASEFNHVTQAWRQPGSAMKPFIYSAALEKGYSPGTLVND
APLTLTSAETGGQPWTPQNDDNVYDGAITLRTALAQSKNVAAVRLLRAITPQYAHDFLPR
FGFDAARQPVNYTLALGTGAVTPLQMAGAFSVFANGGYQINPYLIQKVVDTRGNVLFEAK
PVLPGQESARVLDARNAFITDSMLREVVASGTGAAASKKLARQDLAGKTGTSSDAFDGWF
AGYAGTTTAVAWMGFDEPRSLGAREFGATVALPIWIDYMRSSPSGQPVHYQPQPAGVVQA
QGDWVFEEFRTAGAVWRLDLDPLQWLKGLFGA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccaatcctctctgcccgccttctccaactgctgctgttgtgtgccctgtgctgg
cccatggcgtttgctgccaccccgctggatttgcccagcctggagtccctgaccgactac
cgccccaagattccgctgcgggtgtacaccagtgacaaagtgctgattggtgagtttggc
caggaaagacgagactttgttgctatcaaagacattcccctgatacagcgtcaggcgctg
ttggccattgaagactcgcgcttttacgagcacggtggggtggactacaaaggggtggta
cgcgcggtgctggccgacctgagtggtggcctcaagcagggggcttcaaccatcaccatg
cagctggcgcgaaacttttttctgacccgcgagaagctgttctcgcgcaaactcaccgag
gtcatgctggcctacaagattgagcgggagctgagcaaagaccagattctggagctctac
atgaaccagatttatctgggccagcgggcttacggcttcagcagcgcagcgcgcatttac
ttcggcaagccactgaaagacctgagcttggggcaggcggccatgctggcaggcctgccg
caggcgccgtcaggcatcaacccgatcgtcaaccccattcgcgcccgggcgcgccagaaa
ctggtgttgaagcgcatgctggcgctgggttacatcaccgacgcgcagtacaaggcggcc
ttgaaggaaaacctgggtgtgctggctgagggacagtcggtgggcaaccatgcgcagtac
gttgccgagatggtgcgccaggtgatttatgcccagttcaaggacgaggcctatacccgt
ggcatcaacgtcactacgacgctggtcaatgcggatcagcaggcggcttatgacgcactg
cgccgccaggtgctggcgtatgaccagcgccacggctaccgcgggccggaggcccatgtg
gttttgcccgccaatgccgctgagcgcgagaagctgatcgagaccacgctgcaacagcac
ccagccagcgacacgctgctgtctgcgatggtgctctcggccaagcccgctagcgtgcag
gcggtgctggtcgatggtgacaagattgagctgcaggctgacggcctgcgctgggcggca
gcagcactggcctccaaggcctctgctgcgttgaagatcaagccgggcgcggtgatccgg
gtggtgaaaaatagccggggccgctggagcatcgcgcagttgccagtggtgggcgcggct
tttgtcgcgctgaacaaccagaccggcgcctaccgcgctctggtgggcggctttgatttc
aacgccagcgagttcaaccacgtcacccaggcctggcgccaacccggctccgccatgaag
ccgttcatttactcggcggcgctggaaaaaggctactcgccaggcactttggtgaatgac
gcaccgctgaccctgacctcggctgagaccggtggccagccgtggacgccacaaaacgac
gacaacgtgtacgacggtgccatcaccctgcgcaccgcgctggcgcagtccaaaaacgtg
gcggcagtgcgcctgctgcgtgccatcacgccgcaatacgcgcatgattttttaccgcgt
ttcggctttgacgcggcacgccagccggtcaactacacgctggcgctgggcaccggcgcc
gtcactccgttgcagatggctggcgccttttcggtgtttgccaacggtggataccagatc
aacccctacctgatccagaaggtggtggacacccggggtaacgtgctgtttgaagccaag
ccggtgctgcccggccaagagagtgcgcgcgtgctggatgcacgcaacgccttcatcacc
gacagcatgctgcgcgaagttgttgcctcgggaactggcgcggcggcttcaaaaaagctg
gcccggcaagacctggcaggcaaaaccggcaccagtagcgacgcctttgacggttggttt
gcaggctacgcaggcaccaccacggcggtggcctggatgggctttgatgaaccgcgctcg
ctgggcgcgcgcgaatttggcgccaccgtagccctaccaatctggattgattacatgcgc
agcagcccctctggtcagccagtgcattaccagccccagcccgccggggtggtgcaggca
cagggcgactgggtgtttgaggagtttcgaacggctggggctgtgtggcgtctggacctg
gacccgctgcagtggctcaaaggccttttcggcgcttga
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