Rhodoferax antarcticus: RA876_04290
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Entry
RA876_04290 CDS
T04655
Name
(GenBank) PAS domain-containing sensor histidine kinase
KO
K02668
two-component system, NtrC family, sensor histidine kinase PilS [EC:
2.7.13.3
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA876_04290
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rac01001
]
RA876_04290
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rac02022
]
RA876_04290
02035 Bacterial motility proteins [BR:
rac02035
]
RA876_04290
Enzymes [BR:
rac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RA876_04290
Protein kinases [BR:
rac01001
]
Histidine kinases
NtrC family
RA876_04290
Two-component system [BR:
rac02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
RA876_04290
Bacterial motility proteins [BR:
rac02035
]
Pilus system
Twitching motility proteins
RA876_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS
PAS_8
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
APW48197
LinkDB
All DBs
Position
complement(883365..885023)
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AA seq
552 aa
AA seq
DB search
MDQPQEFERLWRGFMTARATLGLMLALFQVGIYALIPQQSSAPLLICLTYFAAALAVRLT
GQPQQLQRSFDASWLQTVGVDVLAFATLQIVQGGAIDYTPLFALPVLVVGVLGSMLLAMA
TAASVTLLLFAHAAWLMTRHTGDVTGNFLQAALTGAGCFAISFIASQLATRLANVELRAQ
RNQLAVAEQRRVNELVIKSLTDGVLVVDEGGKVRSTNPAACLLLDTRAQNDELDLSTRPG
WQTLMQLVHASFASHHPQQADITVDRPGSSPRRLRVRTQLTGSLKGQTQEQVQGLCVVFM
QDQREIQARIRAEKLAGMGRMSAAVAHEIRNPLAAITQANALLTEDLSDPAQQRLAQMVG
QNALRLENIVKDVLHLAHAGEPGRADSAKSLDICKSTERICRDWGNQHAAGGELGLSLPI
EPLNGWFDVEHLRRVLINLLDNAQRFASHRPSSIQVSLESGGQMPSKIGLTLRVWSDGTV
LDPSVEQHLFEPFFSSESRSSGLGLYICRELCESHGATISYDRSDRLLNQQLVPGNEFRV
VFKPAPDQPATP
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
ctggatcagccgcaggagtttgaacgcctgtggcgcggtttcatgaccgcccgtgccacc
ttggggttgatgctggcactgtttcaggtcggcatttatgcgctgataccgcaacaaagc
agcgcgcccctgttgatctgcctgacttattttgcagcggcgctggcggtgcgcctgacc
gggcagccacagcaactgcagcggtcttttgacgcctcctggctacagaccgtgggggtg
gatgtgctggcttttgccactctgcaaatcgtgcaaggtggtgccattgactacacgcct
ttgtttgcactaccggtgctggtggtcggcgtgctggggtccatgctgctggccatggcc
actgcggccagcgtcaccttgctgttgtttgcccatgccgcttggctaatgacccggcac
accggcgatgtcacaggcaattttttgcaggcagcgctcacgggtgctgggtgtttcgct
atttcattcatagcaagccaactggcgacacgcctggccaatgtggagttgcgggcgcag
cgcaaccagctggctgtcgccgagcagcgccgggtgaacgagctggtgatcaagtcgctg
accgatggcgtgctggtcgtcgacgaaggtggcaaggtccgttccaccaacccagcggcc
tgtctgctgctagacacgagggcgcaaaatgacgagctcgacctgagcacccgtcctggc
tggcagactttgatgcagttggtgcacgccagctttgccagccaccacccgcaacaggct
gacatcaccgttgacaggccaggtagcagcccgcgcaggctgcgagtacgcacccagctg
accggctcactgaagggccaaactcaagagcaagtgcagggcctgtgcgtggtgttcatg
caggatcagcgtgagattcaggcgcgcatcagggccgaaaaactggcaggcatgggtcgc
atgtcggctgcggtggcacatgaaattcgcaacccgctagccgctatcactcaggcgaac
gccctattgaccgaggacctgagcgacccggcgcaacaacgcctggcgcaaatggtcggt
caaaacgcactgcgactggaaaacatcgtcaaagatgtgctgcacctcgcgcatgcgggt
gaacccggccgggcagactccgcaaagtcgctggacatctgcaaaagcacagagcgcatt
tgtcgggattggggcaatcagcatgcggccggtggcgagctcggcttgagcctgcccata
gagccacttaacggctggtttgatgtggagcacttgcgccgggtgttgatcaatctgcta
gacaacgctcagcgcttcgctagccaccgccccagcagcattcaggtcagcctggagagt
ggcggccagatgccttcaaaaattggactgacgctacgcgtttggagcgacggaacggtg
ctggacccgtcggtagagcagcatttgtttgagccttttttttcgtctgagagccgctca
agcgggctggggttgtatatttgccgtgagctgtgcgagagccatggcgccaccatctcc
tacgaccgcagcgacagattactgaaccagcagctggtaccaggcaacgaatttcgcgtt
gttttcaagccagcacctgaccagcccgcaacaccatga
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