Rhodoferax antarcticus: RA876_04320
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Entry
RA876_04320 CDS
T04655
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rac
Rhodoferax antarcticus
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rac03016
]
RA876_04320
Enzymes [BR:
rac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RA876_04320
Transfer RNA biogenesis [BR:
rac03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RA876_04320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
APW45720
LinkDB
All DBs
Position
complement(889254..890615)
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AA seq
453 aa
AA seq
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MSKKVFIKTYGCQMNEYDSDKMSDVLGAAQGYEPTDNVEEADLILFNTCSVREKAQEKVF
SDLGRVKHLKKKGALIGVGGCVASQEGAAIIARAPYVDVVFGPQTLHRLPQMLDERARQN
RSQVDISFPEIEKFDHLPPARVEGASAFVSIMEGCSKYCSYCVVPYTRGEEIHRPFEDIL
VEVAGLADQGVKEITLLGQNVNAWRAKMISHPGTVSDTGEMADFATLLEYVSDIPGIERM
RYVTSHPNEFTPALIAAYDKLPKLVSHLHLPVQHGSDRLLMAMKRGYTAMEYKSTVRKLR
AIRPNMALSSDFIVGFPGETEDDHAKLMKLIDDVGFDNSFSFIFSPRPGTPAANLPDDTP
HDVKLRRLHEVQAAINANMARISQGLVGTVQRILVEGASKRDGGELMGRTECNRVVNFIG
QPRLIGQMVDVSISETRTYTLRGEVHTLELTAG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaagtattcatcaagacctacggttgccagatgaacgagtacgactcggac
aaaatgagcgacgtgctcggcgccgcacaaggctatgagcccaccgacaacgtggaagag
gctgacctgatcctcttcaacacctgctcggtgcgcgaaaaggcgcaggaaaaagtgttt
tctgacctgggccgcgtcaaacacctgaagaagaaaggcgccttgatcggcgtcggcggc
tgcgtggccagccaggaaggcgcggccatcattgcccgcgcgccttatgtggatgtggtg
tttggcccgcagacgctgcaccgcttgccgcagatgctcgacgagcgcgcacggcaaaac
cgctcgcaggtcgacatcagttttcccgagatcgaaaaatttgaccacctcccgcccgcg
cgtgtggaaggtgccagcgcgtttgtcagcatcatggagggctgctccaaatactgtagc
tactgcgtagtgccttacacgcgcggcgaggaaattcaccgcccgtttgaagacattctg
gtggaggtggctggcctggcagatcaaggtgtgaaggagatcaccttgctgggccaaaac
gtgaacgcctggcgcgccaagatgatcagccaccctggcacggtcagcgacaccggcgag
atggccgactttgccaccctgctggaatacgtgtctgacattcccggcattgagcgcatg
cgctatgtcaccagccaccccaacgagttcacgcccgcgctgattgccgcctacgacaag
ctgcccaaactggttagccacctgcacctgccggtacaacacggctcggaccgcttgctg
atggccatgaaacgcggctacaccgccatggaatacaagagcacggtgcgtaaattgcgc
gccatccgcccgaacatggcgctgagttccgacttcatcgtcggctttcccggcgagacc
gaagacgaccacgccaagctgatgaagctgatcgacgatgtggggttcgataacagtttc
agcttcatcttcagcccacgccctggcaccccggcggccaatctgcctgacgacacgccg
cacgacgtcaagctgcgccgcctgcacgaggtgcaagccgccattaacgccaacatggcg
cgcatcagccagggcctggtcggcacggtgcagcgcattttggtggaaggcgcctccaag
cgtgacggcggcgagctgatgggccgcaccgaatgcaaccgggtggtgaacttcattggc
cagccgcgcctgatcgggcaaatggtggacgtcagcatttccgagacccgcacctacacc
ctgcgtggcgaggtgcacacgctggaactcacagcaggttag
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