Rhodoferax antarcticus: RA876_05250
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Entry
RA876_05250 CDS
T04655
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00020
Citrate cycle (TCA cycle)
rac00190
Oxidative phosphorylation
rac00650
Butanoate metabolism
rac00720
Other carbon fixation pathways
rac01100
Metabolic pathways
rac01110
Biosynthesis of secondary metabolites
rac01120
Microbial metabolism in diverse environments
rac01200
Carbon metabolism
Module
rac_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rac_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rac_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RA876_05250 (sdhB)
00650 Butanoate metabolism
RA876_05250 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
RA876_05250 (sdhB)
00720 Other carbon fixation pathways
RA876_05250 (sdhB)
Enzymes [BR:
rac01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RA876_05250 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Fer4_18
Fer4_16
Fer4
Motif
Other DBs
NCBI-ProteinID:
APW45869
LinkDB
All DBs
Position
complement(1075739..1076443)
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AA seq
234 aa
AA seq
DB search
MAKRTFNIYRYNPDTDAKPYMQTIEMELDGSERMLLDALVKLKQVDPTLSYRRSCREGIC
GSDAMNINGKNGLACLINLRTLPDTITLKPLPGLPVIRDLIVDMTLFFQQYHSIKPYLIN
ETRPPEKERLQSPEEREELNGLYECILCACCSTACPVFWWNPDKFVGPAGLLQAYRFIAD
SRDEGTSERLDNLEDPYRLFRCTTIMNCVDVCPKSLNPTAAIGKIKELMVRRAI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgcactttcaatatctaccgctacaacccggacaccgacgccaagccttac
atgcagaccatcgagatggagctcgacggcagcgaacgcatgcttttggatgcactggtc
aagttgaaacaagtagacccgaccttgtcttaccgccgctcctgccgcgagggcatttgc
ggttctgacgcgatgaacatcaacggtaagaacgggctggcctgtctgatcaatctgcgg
accctgcccgatacgatcaccctcaagccgctgccaggcctgccggtgattcgcgacctg
atcgttgacatgacgttgttcttccagcagtaccactcgatcaaaccctacctgatcaac
gaaacccgtcccccagaaaaagagcgcctgcaaagccccgaagaacgcgaggaactgaac
ggcctgtacgagtgtattttgtgcgcctgttgctccaccgcctgcccggttttctggtgg
aacccggacaagtttgtgggcccggcaggcttgcttcaagcctaccgtttcatcgccgac
agccgcgacgaagggaccagcgagcgactggacaacctggaagacccctaccgcctgttc
cgctgcaccaccatcatgaactgcgttgacgtctgccccaagagcctcaaccccaccgcg
gccatcggcaaaatcaaagaactgatggtgcgacgcgccatctga
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