Rhodoferax antarcticus: RA876_05530
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Entry
RA876_05530 CDS
T04655
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RA876_05530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rac03400
]
RA876_05530
Enzymes [BR:
rac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RA876_05530
DNA repair and recombination proteins [BR:
rac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RA876_05530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
NBAS_11th
Motif
Other DBs
NCBI-ProteinID:
APW45918
LinkDB
All DBs
Position
1130573..1130851
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AA seq
92 aa
AA seq
DB search
MHHFAPRDNPPMATASKHAPAATPASYEAALQELEQLVAKLEAGDMPLEQLLTQYQRGAE
LMNFCRDCLAAVQAQVKVLDQGVLKTWTSDER
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgcaccactttgcacccagggataatccgcctatggctacagcttccaaacacgcacca
gcggcaacccccgccagctatgaagccgccttgcaggagctggagcaactggttgccaag
ctggaagcgggtgacatgccgctggagcagttgctcacccagtaccagcgcggtgccgaa
ctgatgaatttttgccgtgattgcttggctgccgtgcaagcgcaggtgaaggtgctggac
caaggcgttttgaaaacctggacttcggacgaacgatga
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