Rhodoferax antarcticus: RA876_05550
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Entry
RA876_05550 CDS
T04655
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11690
TRAP-type transport system large permease protein
Organism
rac
Rhodoferax antarcticus
Pathway
rac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA876_05550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rac02000
]
RA876_05550
Transporters [BR:
rac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RA876_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
APW45922
LinkDB
All DBs
Position
complement(1135131..1136936)
Genome browser
AA seq
601 aa
AA seq
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MEFLQTNMAPVMFMGLIAFLLLGFPVAFSLGACGLFFGFIGIELGILPEALLQALPLRIF
GIMQNETLLAIPFFTLMGLVLERSGMAEDLLDTIGQLFGPVRGGLALAVIFVGALLAATT
GVVAASVISMGLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIILADQLGRSVG
EMYKGAFLPGFMLMGMYVSYVVLVALIRPNWVPALPPEARTLRADNGNSGLPSLLVLTVL
SVGASLFFATHIADVHTWWSGELVTAVAKDETIVVSMCVGVTLAFVLSMLNKVTGLGLLS
RMAERVTFVLIPPLLLIFLVLGTIFLGVATPTEGGAMGAVGAILMATVRARLNLSLLKQA
LMSTTRLSCFVVFILIGSTIFSLVFQGVDGSRWVEHLLTGLPGGQIGFLILVNILIFILA
FFLDFFELSFIVVPLLAPVAQLLGIDLVWFGVLLAVNMQTSFMHPPFGFALFYLRSVAPA
VPYTDRVTKKLIQPITTMQIYWGAVPFVVIQVIMVGLIIAFPGIVSSGLEKKEVYDMDAI
RLQMENQMQELDFQDAGPPESNLIEASPDSPGANDDPAAGEAQGFDDPLKDSEQAIVQEK
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggaattccttcagaccaatatggcgcctgtgatgttcatgggcttgattgctttcttg
ttgctgggctttccggtggccttcagcctgggtgcctgcgggcttttctttggtttcatc
ggcattgagttgggcatcttgcctgaagcgctgttgcaggcgctgccgctgcgcattttt
ggcatcatgcagaacgaaaccctgctggcgattcccttcttcaccctgatggggctggtt
ctggagcgcagtggcatggctgaagacttgcttgacaccatcggccaactgtttggcccg
gtgcgcggtggtctggcgttggcggtgatcttcgtcggcgcgctgctggccgcaaccacc
ggcgttgtggccgcgtcggtgatttccatgggcctgatctcgctgccgatcatgctgcgc
tacggctacgaccgtcgcgtcgcctccggggtgattgctgcgtctggcacgctggcgcag
atcattccaccgtcgctggtgctcatcattctggccgatcagttggggcgcagtgtgggt
gagatgtacaagggcgcattccttccggggttcatgctgatgggcatgtacgtgagctat
gtggtactggtcgcattgatccgcccgaactgggtgccagcactgcccccagaggcgcgc
accctgcgcgccgacaatggcaacagcggtctgccatcgctgctggtgctgaccgtgctg
tcagtgggggcctcgctgtttttcgctacacacatcgccgatgtgcacacatggtggtcg
ggcgagctcgtgactgcagtcgccaaagacgagacgatcgtggtgtccatgtgtgtcggg
gtgacgctggcctttgtgctctccatgctcaacaaagttacggggctgggcctgctctcg
cgcatggccgagcgggtcacttttgtgttgataccaccgttgctgctgatttttctggtg
ctgggcaccatttttctcggcgtggccacgcccaccgaaggcggcgccatgggcgctgtg
ggcgccatcctcatggccacagtgcgcgcacgcctgaacctgtcgctgctcaaacaggcg
ctgatgtcgaccacgcggctgtcatgcttcgtggtcttcatcctgatcggctcaaccatc
tttagtttggtgttccagggcgttgacggctcgcgctgggtggagcatctgctcactggc
ctgcccggcgggcagattggtttcctgatcctggtgaacattctgatctttatcctggcg
ttcttcctggatttcttcgagctgtcattcatcgtggtgccgctgctggcgccggtcgca
caattgctcggcattgaccttgtctggttcggcgtgctgctggcggtgaacatgcaaacc
tcgttcatgcacccaccgtttggttttgcactgttttacctgcgcagcgtggcgccagca
gtgccctacaccgaccgggtgaccaaaaaactaatccagccgattaccaccatgcagatc
tactggggcgcagtgccttttgtggtgattcaagtgatcatggtcggcttgatcatcgcg
ttccctggcatcgtctccagcggcctcgagaaaaaagaggtctatgacatggatgcaatc
cgcttgcagatggaaaaccagatgcaagagctcgactttcaggacgctggcccgcccgag
tccaacctcattgaagcttcacccgatagccctggcgccaacgacgatcccgcagcaggc
gaggcccaggggtttgatgacccgctgaaggactcagaacaggcgattgttcaggaaaag
aaatag
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