KEGG   Rhodoferax antarcticus: RA876_05985
Entry
RA876_05985       CDS       T04655                                 
Name
(GenBank) geranylgeranyl pyrophosphate synthase
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rac  Rhodoferax antarcticus
Pathway
rac00900  Terpenoid backbone biosynthesis
rac01100  Metabolic pathways
rac01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:rac00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    RA876_05985
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rac01006]
    RA876_05985
Enzymes [BR:rac01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     RA876_05985
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     RA876_05985
    2.5.1.29  geranylgeranyl diphosphate synthase
     RA876_05985
Prenyltransferases [BR:rac01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   RA876_05985
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-ProteinID: APW45997
LinkDB
Position
1229157..1230062
AA seq 301 aa
MDLLKRAEKALEFHFERAAGLGAPPRLVEAMRHAVFSGGARVRPQLVLSVAMACGEDAPE
LTDAAACAVELMHCASLVHDDMPAFDNADIRRGRPSVHKAFGEPLALLAGDALIVMAYQV
LLNAGKSDPERLVALMHALSAGVGLPSGIVAGQAWECEVKADLGQYQRAKTGALFVAATC
SGALCCASDAGPWATLGASLGEAYQVADDIRDVMGQAILLGKPSGQDVLHARPSAASELG
LDGAMAHFQSLIELAIASIPECSYRELLQQLVRREAERLVPSAAFAEFKRQSMLAPQSMS
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atggatttgttaaagcgcgcagaaaaagcccttgagttccattttgaaagagctgctgga
ttgggcgcaccgccaagactggttgaggctatgcggcacgcagtgttttctggtggcgcc
agagttcgtccgcaactggttttgtcggtggccatggcctgtggtgaggatgctcccgaa
ttgaccgacgctgcggcctgcgctgtggagttgatgcattgtgcatccttggttcatgat
gacatgcccgcttttgacaatgcggatatccgtcgtgggcggccttcggtgcacaaagcg
tttggagaacctctggctttgttggccggtgatgcgttgattgtgatggcttaccaagtg
ttgttgaacgcgggcaagtctgatcctgagcgcttggtggccttgatgcacgccttgagc
gctggtgtgggattgccatctggtatcgtggcgggacaagcttgggaatgtgaagtaaag
gccgaccttggccagtatcagcgcgccaaaacaggtgcactttttgttgctgctacctgt
tctggcgcattgtgttgcgccagcgacgctggtccttgggcaacgctgggtgcgagcctc
ggtgaggcctatcaggtggcagacgatattcgcgatgtcatgggacaagccattctgctg
ggcaagccctctggtcaagatgtcttgcatgcgcgcccgagtgccgctagtgaactgggt
ctggatggtgctatggcgcactttcagtccctgattgagctggcaattgctagcatcccg
gaatgttcgtatcgggagttgttgcagcagttggttcgccgtgaagccgagcggctggtt
cccagcgctgccttcgctgagttcaagcgccagagtatgcttgcaccccaaagcatgtct
gcttaa

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