Rhodoferax antarcticus: RA876_06765
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Entry
RA876_06765 CDS
T04655
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac03030
DNA replication
rac03430
Mismatch repair
rac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RA876_06765
03430 Mismatch repair
RA876_06765
03440 Homologous recombination
RA876_06765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rac03032
]
RA876_06765
03400 DNA repair and recombination proteins [BR:
rac03400
]
RA876_06765
Enzymes [BR:
rac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RA876_06765
DNA replication proteins [BR:
rac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RA876_06765
DNA repair and recombination proteins [BR:
rac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RA876_06765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GIY-YIG_UvrC
UvrC_M
Cho_C
GIY-YIG
Bclx_interact
AAA_SpoVK_N
Motif
Other DBs
NCBI-ProteinID:
APW46124
LinkDB
All DBs
Position
complement(1386529..1387953)
Genome browser
AA seq
474 aa
AA seq
DB search
MLPCYVLLDLETTGGNAVRDRITEIAAVRFEHGVEVARWSTLVNPGVFISGFITQLTGIS
NALVADAPAFDQVGVQLLKLLDGAVLVAHNVRFDHGFLLHEFARMDVALRTKTLCTVRLS
RLLYPGIKGHGLDAIMQRHGITTESRHRAMGDVQVMQTWLKQVAQQFGAAHLRQQALVLL
QGSAALPPQLDTHVADIPEGPGVYIFYGEGTLPLYIGKSVKLRSRVMSHFSAASREPREM
RIAQEIRRIEWVETAGELGALLLEARLVKKHQPLHNRQLRRESSLCAWRLDANPNARPLL
TLVRGAELSPEQFGNLYGPYRSKNQAISHLRELADAHGLCLQALGLESGKGRCFAHQIGH
CKGVCCGEEAPERHHLRLQMVLSADKLRVWPFAGPVGLREHNPHTGKGEMHIFNQWCHLT
TVRSDEDLQEALQTRTEVLAFDLDSYRLALKYLMPPGKVGLTLIHLNSSSKNGF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgctgccctgttacgttctgcttgacctggaaaccaccggcggcaacgcggtgcgtgac
cgcatcaccgagattgcagccgtgcgttttgagcacggtgtggaggtggcgcgctggagc
acgctggtcaacccgggcgtgttcatctctggcttcatcacgcagctcaccggcatcagc
aacgcgctggtggccgacgcacccgcgtttgaccaagtgggcgtgcagctgctgaaactg
ctcgacggtgcggttttggtggcgcacaacgtgcggtttgaccatggttttttgctgcat
gaatttgcccgcatggacgtcgcgctgcgcaccaaaacgctgtgcacggtgcgcctgtcg
cgcttgctgtacccgggcatcaaaggccacgggctagacgccatcatgcagcgccacggc
atcaccaccgagtcgcggcaccgcgccatgggcgacgtgcaggtgatgcaaacctggctg
aagcaagtggcccagcagtttggcgcggcacacctgcggcaacaggccttggtgttgctg
caaggcagcgcagccctgccgccgcaactcgacacccatgtggccgacatccccgaaggc
cccggcgtgtatattttttacggcgaaggcacgctgcctctgtatattggcaagagtgtc
aagctgcgcagccgggtgatgtcgcacttctctgccgcaagccgcgagccgcgcgagatg
cgcattgcgcaggaaatccgccgcatcgagtgggttgagaccgctggcgaactgggcgcg
ctgctgctggaagcccgcttggtaaaaaagcaccagcccctgcacaaccgccagctgcgc
cgcgagagcagcctgtgcgcctggcgcctggatgccaacccgaacgcccgcccgctgctc
accttggtgcgcggcgcggaactctcgcccgagcagtttggcaatttgtatggcccgtat
cgctccaaaaatcaggccatcagccacctgcgcgaactcgccgacgcccacggcctgtgc
ctgcaggcgctaggcttggagtctggcaagggccgctgttttgcccaccagatcggccac
tgcaaaggcgtgtgctgcggcgaagaagcgcctgagcggcatcacctgcgcctgcaaatg
gtcctgagcgctgacaaactgcgcgtctggccgtttgccgggccagtgggcctgcgtgag
cacaacccgcacacgggcaaaggcgagatgcatatctttaaccagtggtgccacctgacc
accgtgcgcagtgacgaggacctgcaggaggccttgcaaacgcgcaccgaggtgctggcg
tttgacctggacagctaccggctggcgctcaaatatttgatgccgccgggcaaagtcggc
ctgaccttgatccacctgaattcttcaagcaaaaatggcttctag
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