Rhodoferax antarcticus: RA876_10640
Help
Entry
RA876_10640 CDS
T04655
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rac
Rhodoferax antarcticus
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rac03016
]
RA876_10640
Enzymes [BR:
rac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RA876_10640
Transfer RNA biogenesis [BR:
rac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RA876_10640
Prokaryotic type
RA876_10640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF7059
Motif
Other DBs
NCBI-ProteinID:
APW48369
LinkDB
All DBs
Position
2201880..2202836
Genome browser
AA seq
318 aa
AA seq
DB search
MNARGGQHTRVARRPVHGVLLLDKPLGWSSNDILQKVKWLLRAEKAGHTGTLDPLASGVL
PLCFGAATKFSQLQLDADKTYEAVMCLGIKTSTADAEGEVIETRPVAVSPEDVAQVALRF
TGPISQVPPMHSALKKDGKALYEYARAGIEIDRAPRQVMIYKLNMALALDSKAQVAINLE
VTCSKGTYIRTLGEDIGEALGCGAHLSALRRVGTGGYTAAQCVTLAALQAMSEEERLACL
LPVSSLLPDHTVVTLDDENAARFSSGLLRRGPWPDAPQVAVYAENGQVLLGTAQVVAGEL
IPGRLLSPTDIEQMTQAI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgcgcgtgggggccagcatacccgggttgccaggcgccccgtgcatggggtgctg
ctgctggacaagcctctgggttggtccagcaacgatattttgcaaaaggtgaagtggctg
ttgcgcgcggaaaaggccggccataccggcacgctggacccattggccagtggcgtgttg
cccttgtgttttggtgccgccaccaaattcagccagctgcaactggatgccgacaaaacg
tatgaagcggtgatgtgcctgggtattaaaaccagcacagcagacgctgagggcgaggtg
attgagacacgtccggtggcggtgtcgccagaggatgtggcgcaggtggcgctacggttt
accgggcccatcagccaggtgccgcccatgcacagcgcactaaagaaggatggcaaggcg
ctctatgagtacgcgagagccggtatagagattgaccgggccccgcgccaggtcatgatt
tataagctaaatatggctctagcccttgatagtaaagcgcaggtagctattaatttagaa
gtaacctgcagcaagggaacgtacatccgcaccctgggtgaagacatcggcgaggctttg
ggttgcggtgcacacctgagcgcgctgcgccgggtcgggacaggtggttataccgcggcg
caatgtgtcacgttggcggcgctgcaagccatgagcgaagaagagcgcctagcttgcctg
ctgccggtgtcgtctttgttgcctgatcacacggtggtcacgctcgacgatgagaatgct
gcgaggttttcaagcggcttgctgcgccgcggcccttggcccgacgcaccgcaggtggcg
gtttatgcagaaaatggccaggtgctgctgggtacagcgcaggtggtggccggtgaattg
atcccgggtcggctgctgagtccgaccgacattgaacagatgacacaagctatttaa
DBGET
integrated database retrieval system
