Rhodoferax antarcticus: RA876_11390
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Entry
RA876_11390 CDS
T04655
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00220
Arginine biosynthesis
rac00240
Pyrimidine metabolism
rac00250
Alanine, aspartate and glutamate metabolism
rac01100
Metabolic pathways
rac01110
Biosynthesis of secondary metabolites
rac01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RA876_11390 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RA876_11390 (carB)
00220 Arginine biosynthesis
RA876_11390 (carB)
Enzymes [BR:
rac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RA876_11390 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
APW46863
LinkDB
All DBs
Position
complement(2356534..2359833)
Genome browser
AA seq
1099 aa
AA seq
DB search
MAKRNDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT
ADVTYIEPITWKTVEKIIAKERPDAILPTMGGQTALNCALDLWHNGVLDKYTGAATGKPI
ELIGATPEAIDKAEDRLKFKDAMTKIGLGSAKSGIAHSMSEAWDVQRTLGFPTVIRPSFT
LGGTGGGIAYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFAINPEDG
RMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSID
YVVTKIPRFAFEKFPLADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGMNEKT
QDRELLEKELGEPGPERIWYVGDAFAAGWSVDEVFDITKIDKWFLVQIEQIVQLELEIER
LPQPAIGTALDSIDAATLRALKQKGFSDRRLAKQFKTTDTAVRARRHALGVRPVYKRVDT
CAGEFATDTAYLYSTYEAEGSECEAAPTNRKKIMVLGGGPNRIGQGIEFDYCCVHAALAM
REDGFETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPTGVIVQYGGQTPLK
LALDLEANGVPIIGTSPDMIDAAEDRERFQKLLNELKLRQPPNATARTEPEALDKAAALG
YPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLSDAIECDVDAVRD
SVGRVFIGGVMEHIEQAGVHSGDSACSLPPYYLKQATVDEMKRQTAAMAEGLNVVGLMNV
QFAIQQKDGQDIIFVLEVNPRASRTVPFVSKATGIQLAKVAARCMVGQTLDAQGVGAEVH
PPYFCVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQIGAGSKLPLPRK
PDGTPSGKVFISVKGSDKPQAIEIARALVAMDFVIVATKGTAAAINAAGVPCGVVNKVTE
GRPHIVDMLKNDEIVLVINTVEERRNAIADSRQIRTSALLSRVTTFTTIFGAEAAVEGMR
CMDSLDVISVQEMHAQLKG
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagaaacgatctcaagagcatcctgatcattggcgcgggccccatcatcatc
ggccaggcctgcgagtttgactactctggcgtgcaggcctgcaaggcgctgcgcgaagag
ggttacaaggtcattctgatcaacagcaacccggccaccatcatgaccgacccggcgacc
gccgatgtgacctacatcgagccgatcacctggaagacggtggaaaaaatcatcgccaag
gagcgccccgacgcgattctgcccaccatgggcggccaaaccgcgctgaactgcgcgttg
gacctgtggcacaacggcgtgctggacaaatacaccggtgccgccaccggcaagccgatc
gagctgattggcgccacccccgaggcgatcgacaaggccgaagaccgcctgaagttcaag
gacgccatgaccaaaattggtctgggttcggccaagtctggcattgcccacagcatgagc
gaggcctgggacgtgcagcgcacgttgggttttcccaccgtgatccgccccagcttcacg
ctcggtggcaccggcggcggcattgcctacaaccccgaagagtttgagaccatctgcaag
cgcggcctggaagcctcacccaccaacgagttgctcattgaagaatcgctgctcggctgg
aaagagtacgagatggaagtggtgcgcgacaaggcggacaactgcatcatcgtctgctcg
attgaaaacctcgacccgatgggcgtgcacaccggcgactcgatcaccgtggccccggcg
caaacgctgactgacaaggaataccagatcctgcgtaacgcctctttggcggtgctgcgt
gagattggcgtggacaccggcggctccaacgtgcaattcgccatcaaccctgaagatggc
cgcatggtcgtcattgagatgaacccgcgtgtgagccgttcctccgcactggcctccaaa
gccactggtttcccgattgccaaggtggctgccaaactggccgtgggttacacgctggat
gagttgcgcaacgagatcaccggcggtgcgaccccggcgtcgtttgagccgtccatcgac
tacgtggtcaccaagattccgcgttttgcttttgagaaatttcccttggccgacagtcgg
ctgacgacgcaaatgaagtcggtgggcgaggtcatggccatgggtcgcaccttccaggag
tcgttccagaaagccctgcgcgggctggaagttggcgtggacggcatgaacgaaaaaacg
caagaccgcgaactgctggaaaaagagctgggtgagcccggcccggagcgcatctggtac
gtcggtgacgcttttgccgctggctggagcgtggacgaggtgtttgacatcaccaagatc
gacaagtggttcctggtacagattgagcagatcgtccaactggaattggagatcgagcgc
ctgccgcagcccgccatcggcaccgcactggacagcatcgatgccgcgacgctgcgcgcc
ctgaaacaaaagggtttttcagaccgccgcctggccaaacagttcaagaccaccgacacc
gccgtgcgcgctcgccgccacgccctgggcgtgcgcccggtgtacaagcgggtggacacc
tgtgctggcgaatttgccaccgacaccgcctacctgtactcgacctatgaggccgaaggc
agcgaatgcgaggccgcgcccaccaaccgcaaaaagatcatggtgctgggtggtggcccg
aaccgcatcggccaaggcattgagttcgattactgctgcgtgcacgcggcgctggccatg
cgtgaagacggttttgaaaccatcatggtcaactgcaaccccgaaacggtttccaccgac
tacgacacctcagaccgcctctactttgagccactcacgctcgaagacgtgctggagatt
gtcgacaaggaaaaacccaccggggtgatcgtgcaatacggcggccaaacaccgctcaaa
ttggcgctggacctggaagccaatggcgtgccgatcatcggcaccagccccgacatgatc
gatgctgccgaagaccgtgagcgttttcagaaactgctcaatgaactcaagctgcgccaa
ccacccaacgcgaccgcccgcactgagccagaagcgctggataaggctgccgccttgggt
tacccactggtggtgcgcccgagctacgtgctgggtggccgggcgatggaaatcgttcac
gagcagcgcgacttggagcgctacatgcgtgaagccgtcaaggtttcccatgattcaccg
gtgttgctggaccgctttttaagcgatgccatcgaatgcgatgtggacgcggtgcgcgac
tcggtcggccgagtgtttattggcggggtgatggagcacattgaacaagccggtgtgcac
agtggtgactcggcctgttcgctgccgccgtattacctgaaacaggccaccgtcgatgag
atgaagcgccagaccgccgccatggccgaaggtttgaacgtggtcggcctgatgaatgtg
cagttcgctatccagcaaaaggacggccaggacatcatctttgtgctcgaagtcaatcca
cgtgcctcgcgcaccgtgccgtttgtctccaaagccaccggcattcagctggccaaagtg
gcggcgcgctgtatggttggccagacgctggacgcgcaaggcgttggcgccgaggtgcat
ccaccgtatttctgcgtcaaggaagcggtgttcccgtttgtcaagttccccggtgtcgac
accatccttggccccgagatgaagtccaccggtgaagtcatgggcgtgggcaagaccttt
ggcgaggcctttgtcaagtcgcagatcggcgcgggttccaagctgccactgccccgcaaa
ccggatggcacacccagcggcaaggtgtttatctcggttaaaggcagtgacaaaccacag
gcgatcgagatagcacgggcgttggttgctatggattttgtgattgtggccaccaaggga
acagctgccgcgatcaacgccgctggcgtgccctgcggcgtggtcaacaaggtgaccgag
ggccgcccccacattgtggacatgctgaaaaacgacgagatcgtgctagtcatcaacacc
gtggaagagcgccgcaatgccattgccgactcgcgccagatccgcacttcagcgctgctc
agccgcgtgacgactttcaccaccattttcggcgccgaggctgccgtggagggcatgcgt
tgcatggattctctggacgttatttcggtgcaggagatgcatgcgcaattgaagggctga
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