Rhodoferax antarcticus: RA876_11845
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Entry
RA876_11845 CDS
T04655
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00260
Glycine, serine and threonine metabolism
rac00460
Cyanoamino acid metabolism
rac00630
Glyoxylate and dicarboxylate metabolism
rac00670
One carbon pool by folate
rac00680
Methane metabolism
rac01100
Metabolic pathways
rac01110
Biosynthesis of secondary metabolites
rac01120
Microbial metabolism in diverse environments
rac01200
Carbon metabolism
rac01230
Biosynthesis of amino acids
rac01240
Biosynthesis of cofactors
rac04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RA876_11845 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RA876_11845 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RA876_11845 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RA876_11845 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RA876_11845 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RA876_11845 (glyA)
Enzymes [BR:
rac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RA876_11845 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
APW46933
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Position
2458183..2459427
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AA seq
414 aa
AA seq
DB search
MFNRNILIEQTDPELFAAIQSENQRQQDHIELIASENYASPAVMAAQGTQLTNKYAEGYP
GRRYYGGCEFVDIAEQLAIDRVKQIFGAEAANVQPHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNAVSYGLDANEAIDYEAMERKAHEHKPKLIIAGASAYSLA
IDFERFAKVAKDVGAIFMVDMAHYAGLIAAGVYPNPVPHADVVTSTTHKSLRGPRGGIIL
MKSQHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKLYQQQVLVNARVVAETLT
ARGLRIVSGRTESHLMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKEEEARMTANLIADVLDNPRDATNIDAIRAKVNALTARFPVYG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccgcaatattctcatcgagcaaaccgacccagagttgtttgctgccatccaa
tccgaaaaccagcgtcagcaagaccatattgagctgatcgccagcgaaaactacgcctcg
cctgccgtgatggccgcgcaaggcacccaactcaccaacaaatacgccgagggttacccc
ggccgccgctattacggtggctgcgagtttgtcgacattgccgaacaactcgccattgac
cgtgtcaaacagatttttggtgctgaagcggccaacgtgcagccgcactgcggcgcatca
gccaacgaggccgtctttttggcctttttgaaacccggcgacaccatcatgggcatgagc
ctggccgaaggcggccacctgacgcatggcatggcgctgaacatgagcggcaaatggttc
aacgcggtcagctacggcctggatgcgaacgaagccattgactacgaagccatggagcgc
aaggcccacgaacacaagccaaaactcatcatagccggtgccagtgcttactctctagct
attgattttgaacgtttcgccaaggtagccaaagatgtgggcgcgatcttcatggtcgac
atggcccactacgccgggctgattgctgcaggcgtttaccccaacccggtgccgcacgcc
gatgtggtcaccagcaccacccacaagagcctgcgcggcccgcgtggtggcatcattttg
atgaaatctcagcacgagaaagccatcaacagcgccatcttccccggcctgcagggcggc
ccgctgatgcacgtgattgcggccaaggcagtggctttcaaggaagcgctgcaacccgag
ttcaagctgtaccagcaacaagtgctggtcaacgcccgcgtggtggccgaaacgctcact
gcacgtggcctgcgcattgtgagtggccgcactgagagccatttgatgctggtcgacctg
cgcgccaagggcatcaccggcaaagaagccgaggcggtgctgggcagcgcgcacatgacc
atcaacaaaaacgccatccccaacgaccccgaaaaacccatggtcaccagcggcgtgcgc
attggcacacccgccatgaccacccgcggcttcaaggaagaagaagctcgcatgactgct
aatttgatcgcggacgtgctggacaacccaagagacgctaccaacattgatgcgatacgc
gccaaggtcaacgcgctaaccgcacgcttcccggtctacggttaa
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