Rhodoferax antarcticus: RA876_11965
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Entry
RA876_11965 CDS
T04655
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00730
Thiamine metabolism
rac01100
Metabolic pathways
rac01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RA876_11965
Enzymes [BR:
rac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RA876_11965
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
APW46955
LinkDB
All DBs
Position
complement(2483459..2485384)
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AA seq
641 aa
AA seq
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MTIHSPAVDISQITRRITRTPFAGSSKIYLTGSRPDIRVPFREVALTDTLVKSGPTQADV
SRVPNPPLRLPDASGVYTDPSVEIDITRGLQALRSGWIAERLDTQALPGLSSAYGQQRLS
EPSLSALRMAQPPIPRRAKTGANVTQMHYARRGLITPEMEFVAIRENLVRAQLAQRLATE
RLPRPGQAFGALMAQPVTPEFVRDELARGRAVIPCNINHPESEPMIIGRNFLVKVNANIG
NSATTSGIEEEVDKLVWSIRWGADTVMDLSTGENIHETREWLLRNSPVPIGTVPLYQALE
KVNGKAEELSWPLFRDTLIEQAEQGVDYFTIHAGVRLAYVPLTANRLTGIVSRGGSIMAK
WCLSHHRESFLYAHFEDICDIMKAYDVSFSLGDGLRPGSIADANDEAQFAELHTLGELTQ
IAWKHDVQVMIEGPGHVPLQMVKENVDKQLSACFEAPFYTLGPLITDVSPGYDHISSAMG
AANIGWYGTAMLCYVTPKEHLGLPNRDDVKQGLIAYKIAAHAADLAKGYPGAQMWDNAIS
KARFEFRWEDQFRLAIDPDTAMAYHDETLPKDNAKLAHFCSMCGPKFCSMSISQEVREFA
RIQSANALLAGSDGAPDAAQVSSALAEKAAEFRVAGQELYT
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
ttgaccattcactcacctgcagtagacatcagccaaatcacccgtcgcatcacgcgcacg
ccgtttgctggctcgtccaaaatttacctcactggctcgcgccccgacatccgggtgccg
tttcgcgaggtcgccctcaccgacacgctggtcaagtctggccccacgcaagctgatgtc
agccgcgtaccgaacccgcctttgcgcctgccggatgcctccggcgtgtacaccgaccca
agcgttgagattgacattacccggggcctgcaagccctgcgcagcggctggattgccgaa
cggctggatacgcaagcgctgcccggcttgagcagcgcctacggccagcagcgcttaagc
gagcccagcttgagcgctctgcgcatggcccagccgcccattccccggcgggcgaagacc
ggcgccaatgtgacgcagatgcactatgcgcgccgtggcctgatcacgccggagatggaa
tttgtcgccatccgtgaaaacctggtgcgcgcgcaactcgcccagcgcctcgccaccgag
cgcttgccccgacccggccaggcctttggcgcgctgatggcgcagccggtcacgccagaa
tttgtgcgcgacgagctggcgcgcgggcgcgcagtgatcccgtgcaacatcaaccacccc
gagagcgagccgatgatcattggccgcaactttctggtcaaggtcaatgccaacattggc
aactcagccaccacctcaggcattgaagaagaggtggacaagctggtctggtcgatccgc
tggggcgccgacacggtgatggacctgtccaccggcgagaacattcatgaaacccgcgag
tggcttctgcgcaactccccggtaccgattggcaccgtgccgctgtaccaggcgctggaa
aaggtcaacggcaaagccgaagaactgagctggccgctgtttcgtgacacgctgattgag
caggccgagcagggcgtggactatttcaccattcacgccggggtgcgcctagcctatgtc
cccctgaccgcgaaccggctcaccggcatcgtctcgcgcggcggctcaatcatggccaaa
tggtgcctctcgcaccaccgtgaaagctttctctacgcgcattttgaagacatctgcgac
atcatgaaagcctacgatgtgagcttttcgctgggcgacggcctacgccccggctcgatt
gccgatgccaacgatgaagcccagtttgccgaactgcacacgctgggcgagctgacgcaa
atcgcctggaagcatgatgtgcaggtgatgattgaaggccccggccatgtgcccctgcaa
atggtcaaggaaaacgtcgacaagcaactcagcgcctgttttgaagcgccgttctacacc
ttggggccgctaatcaccgacgtgtcaccgggctatgaccatatttcgtcagccatgggc
gcggccaacattggttggtacggcaccgccatgctgtgttacgtcacgcccaaggagcat
ctgggcttgccgaatcgcgacgacgtgaaacagggtttgatcgcctacaaaatcgccgcc
cacgccgcggacttggccaaaggctaccccggcgcgcagatgtgggacaacgcaatcagc
aaggcgcgctttgaatttcgctgggaagaccagttccgcctagccattgaccccgacacg
gccatggcgtaccacgacgaaaccttgcccaaagacaacgccaagctggcgcatttttgc
tcgatgtgcgggcccaaattctgttcgatgagcatctcgcaagaggtgcgcgaatttgcc
cgcattcaatcggcgaatgcgctactggcgggctctgatggcgcgcccgatgctgcgcag
gtcagcagcgcgctggcagaaaaagccgccgaattccgtgtggctgggcaagaactttat
acatga
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