Rhodoferax antarcticus: RA876_12825
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Entry
RA876_12825 CDS
T04655
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rac
Rhodoferax antarcticus
Pathway
rac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA876_12825
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_12
HemolysinCabind
PA14
Big_13
GLEYA
Motif
Other DBs
NCBI-ProteinID:
APW47096
LinkDB
All DBs
Position
complement(2674631..2678476)
Genome browser
AA seq
1281 aa
AA seq
DB search
MATVQNSVEAKGIVVALKGNAWLVDPDGSRRLLKVGDEVQEGQRVVTENGAELELSLPNG
QQVSVASARELLIDATLLGTAPLDATEAALKDLNSGASDLAQALAAGGDLLTELDPTAAG
LTGGEASDSHGFVRVLRIVEAVDPLSIGRGPDDVTNDLNLYVGTATGLAEGEVPPVPGIT
LAPTITLGANITADDIINQAEAGQNIPITGVVAGDAKVGDTVTLTVNGNTFTGLVQAGKT
FSIEVPGADLVADPDKTIQASVSTTDAAGNTASASDTEGYQVDTAPPVPTITLDANITAD
DIINQAEADQNIPITGVVAGDAKVGDTVTLTVNGNTFTGLVQAGKTFSIEVPGADLVADP
DKTIQASVSTTDAAGNTASASDTEGYQVDTAPPVPTITLGANITADDIINQAEAGQNIPI
TGVVAGDAKVGDTVTLTVNGNTFTGLVQADKTFSIEVPGADLVADPDKTIQASVSTTDAA
GNTASASDTEGYQVDTAPPVPTITLGANITADDIINQAEAGQNIPITGVVAGDAKVGDTV
TLTVNGKTFTGLVQADKSFSINVPGADLVADPDKTIQASVSTTDAAGNTASASDTEGYGV
DASAPAVTVDILDASLNVADRVSEVSFTFTQAPVGFTLDDITATNGTLSNLQPTSDLLVF
TATFTANVGFEGDGQVSVAAGSYTNAAGNPGSAGSDTVNIDTTPPELSITLDANITADDI
INQAEAGQNIPITGVVEGDAKVDDTVTLTVNGNTFTGLVQADKTFSINVPGADLVADPDK
TIQASVSTTDAAGNTASASDTEGYQVDTAPPGDVYLTSQTKEIGNLGLSGEYFGHNDNRT
GAANDTLYSGTTATRLHSDDGKFGNVDSLADVERIIEDRNGNADLVGSTASGAAKADATF
SANKLEFGLHSGSNTPLFSNDLGQNGKVETGSIGAAASSGGANNLYNFLKVTSGNADALA
ATSGLGDTTDAVIRMVGYIYIPAGGAYDLRITADDGYRVRIGGQDLAQADYIQQTTTEVY
SNQPISEGLQPIEILYWDQGGHASLRVEVKSSGTADATYKIIGNDEFALFSPSDLPVLTA
NQDIVESTTNGVWAVRTGETYTGTEASEKVIGSDGRDTIHTGAGNDTVNAGAGNDTVNAG
DGADVISGGAGNDLLTGGLGSDTFVWALADQGIMGAPARDTITDFNTASHTAGGDVLDLR
DLLTGENHTSGTGNLTSYLHFEKTGSDTVVHISSNGEFSGGFSAAKDVQTITLSGVDLIG
SSSTDQQVIQSLLNNHKLITD
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
gtggctactgttcaaaattctgttgaagctaaaggcattgttgtcgccctcaagggtaat
gcttggttggtcgacccggatggcagccgcaggcttctgaaggttggcgatgaagtgcag
gaaggccagcgcgtcgtcacagaaaatggcgcagaacttgaattgtctctgcccaacggc
caacaggtctcagtggcctccgccagagaattgctgattgacgcaacccttttgggcact
gcgcctttggatgctaccgaggcagcgctgaaagacttgaacagtggtgccagtgatctc
gctcaagcgcttgctgctggcggtgatcttttaacggaacttgatccaacggctgcgggt
ttaacgggaggcgaagccagcgactcgcatggttttgtgcgcgtgttgcgaattgttgag
gccgttgatccgttgtccattgggcgtggtcctgatgatgtaaccaatgacctgaacctg
tatgttggcactgcgactggacttgccgaaggcgaagtgcccccagtacctggcatcacg
ttggcacccacgatcacgctgggtgccaacatcacagcagacgacatcatcaaccaagcc
gaagcaggccaaaacatccccatcaccggcgtcgtcgcaggcgatgccaaggtcggtgac
accgtcaccctgaccgtcaacggcaacaccttcaccggcttggtgcaggccggcaagacc
ttctccattgaggtccccggcgccgacctggtggctgaccctgataaaaccatccaggcc
agcgtgagcaccacggatgctgcgggcaacaccgccagcgccagcgacaccgaaggctac
caagtcgacactgcgcccccagtacccacgatcacgctggatgccaacatcacagcagac
gacatcatcaaccaagccgaagcagaccaaaacatccccatcaccggcgtcgtcgcaggc
gatgccaaggtcggtgacaccgtcaccctgaccgtcaacggcaacaccttcaccggcttg
gtgcaggccggcaagaccttctccattgaggtccccggcgccgacctggtggctgaccct
gataaaaccatccaggccagcgtgagcaccacggatgctgcgggcaacaccgccagcgcc
agcgacaccgaaggctaccaagtcgacactgcgcccccagtacccacgatcacgctgggt
gccaacatcacagcagacgacatcatcaaccaagccgaagcaggccaaaacatccccatc
accggcgtcgtcgcaggcgatgccaaggtcggtgacaccgtcaccctgaccgtcaacggc
aacaccttcaccggcttggtgcaggccgacaagaccttctccattgaggtccccggcgcc
gacctggtggctgaccctgataaaaccatccaggccagcgtgagcaccacggatgctgcg
ggcaacaccgccagcgccagcgacaccgaaggctaccaagtcgacactgcgcccccagta
cccacgatcacgctgggtgccaacatcacagcagacgacatcatcaaccaagccgaagca
ggccaaaacatccccatcaccggcgtcgtcgcaggcgatgccaaggtcggtgacaccgtc
accctgaccgtcaacggcaaaaccttcaccggcttggtgcaggccgacaagagcttctcc
atcaacgtccccggcgccgacctggtggctgaccctgataaaaccatccaggccagcgtg
agcaccacggatgctgcgggcaacaccgccagcgccagcgacaccgaaggctacggcgtt
gacgccagcgcccctgcggtgacagtggacatccttgacgccagcctgaacgtggctgac
agagtctccgaggtgagcttcaccttcacccaagcgccggtgggctttacccttgatgac
atcacagccaccaacggcaccctgagcaacctgcagcccacatctgatctactggtcttc
acagcgaccttcaccgccaatgtcggctttgaaggcgatggccaagtctccgtggcagcg
ggcagctacaccaacgcagcgggcaaccctggcagcgctggcagcgacacggtgaacatt
gacacaacgccaccggaactcagcatcacgctggatgccaacatcacagcagacgacatc
atcaaccaagccgaagcaggccaaaacatccccatcaccggcgtcgtcgaaggcgatgcc
aaggtcgatgacaccgtcaccctgaccgtcaacggcaacaccttcaccggcttggtgcag
gccgacaagaccttctccatcaacgtccccggcgccgacctggtggctgaccctgataaa
accatccaggccagcgtgagcaccacggatgctgcgggcaacaccgccagcgccagcgac
accgaaggctaccaagtcgacactgcgcccccaggggacgtttatctcaccagtcagaca
aaggaaatcggcaatcttggcctgtcgggcgagtattttgggcacaacgacaaccgaaca
ggcgccgcgaacgatacgctttactcaggaacaacagcaactaggttgcactcggacgat
ggaaaatttggcaacgtggacagcttggccgatgtcgaaagaatcatcgaagaccgcaac
ggcaacgcagacctggttggtagtaccgcttcgggtgcagccaaagctgacgctactttc
tccgccaacaaacttgagtttggcttgcattcgggatcgaacacgccgttgttcagcaac
gatctaggtcaaaacggcaaggtcgagacggggtctattggtgccgcagcctcctcgggt
ggcgccaacaacctttataacttcctgaaggtgacttcaggcaatgccgatgccttggct
gccaccagcggtttgggtgacaccaccgacgctgtgatccggatggttggttacatctat
atcccagcaggcggtgcgtacgacttgcgcattactgcagacgacggctatcgcgtccgg
attggtggtcaagacttagcgcaggcggactatatccagcaaacgacaaccgaggtctat
tcaaatcaaccaatttcagaaggcctgcaacccattgaaattttgtattgggatcagggt
ggccatgccagcctgcgtgttgaagtcaagtcttctggcaccgcagacgccacttacaaa
attatcggtaacgatgaatttgcactgttttcgccgtcagacttaccggtgctcaccgcc
aaccaagacatcgttgaatccaccacaaacggcgtctgggcggtgcgaacaggtgaaacc
tacacgggcacggaggcttctgaaaaggtaattggcagtgacgggcgtgacaccatccac
accggcgcaggcaacgacactgtcaatgcgggcgcaggcaacgacactgtcaatgcgggc
gacggtgcagatgtcatatcaggcggcgcgggtaacgacctgctcaccggtggcttgggc
tctgacacgttcgtgtgggcgctggctgatcaaggcatcatgggcgccccagcccgcgac
accatcacagacttcaacacggcttcgcacactgcggggggcgatgtgcttgacctgcgc
gacctgctgaccggtgagaaccacacttcaggcactggcaacttgaccagctacctgcac
tttgaaaagacgggcagtgacaccgtggtgcacatcagcagcaacggggaattctccggt
ggcttcagcgctgccaaagacgttcagaccatcaccctgagcggtgttgatttgattggc
tcctccagcaccgatcagcaagtgattcagagcttgctgaacaaccacaaattgatcact
gactag
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