Rhodoferax antarcticus: RA876_12840
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Entry
RA876_12840 CDS
T04655
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
rac
Rhodoferax antarcticus
Pathway
rac02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RA876_12840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rac02000
]
RA876_12840
02044 Secretion system [BR:
rac02044
]
RA876_12840
Transporters [BR:
rac02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RA876_12840
Secretion system [BR:
rac02044
]
Type I secretion system
Adhesin protein transporter
RA876_12840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
ABC_ATPase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
APW47099
LinkDB
All DBs
Position
complement(2680647..2682776)
Genome browser
AA seq
709 aa
AA seq
DB search
MGEHSAHFDPLLQCVVAMARIFGTTTTAEALSAGLPLENNLITPALLPRAAARAKLTAKL
ARRKLADLRPGLLPVILLLKDNQACILLEWLPDGQARVRFAESGESADVLSKDELDAVYG
GIVFFVRPVFNFDQRAPDTGHIKSRHWFWGVVFQNWRLYRDSLLAAALINLFALALPLFT
MTVYDRVVPNRAQETLWVLAIGVVLMLFFDTALRTVRAYVLDTAGKRIDVTLSAKIMGKV
LGMKMADRPVSVGSFAANLRAFEAVRDFVASASITTLVDIPFVFVFFFVLAWISPWLILP
PLISIILLLISGLLVQQKMQELVDVTQRAASQRNATLVESLVGIETIKVMVAESSFQRKW
EHSTIFLAQKGSKLKFLSAAVMNFAQTLQQFVTVAVLVVGVYLLIDKQVSMGGIIAASML
AGRAMAPFGQVAGLLMQFHHAKNGLASIEGHMKTPSERGGDAAFLHRTRFQGQIEFKNVS
FTYPGQQQGALNKVSFKIQAGEKVALIGRVGSGKSTIQKLILGLHQPTEGAISIDGIDMR
QIDPAELRRAAGYVSQDVSLFYGSLKENIALGAPFADDQDIIDAAEIAGVAEFANRHPQG
YDMAIGERGESLSGGQRQAVGIARAVLNDSPILLLDEPSSAMDHQSEDALKTRLRRFSAG
KTVVLVTHRNVLLEMVDRLIVIDNGQIMADGPKAQVVEALQSGRIGKAA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgaacacagtgcccattttgatccgctgttgcagtgcgttgtggccatggcgcga
atttttggcacgacgacgacggccgaagccctttcagcaggtctaccacttgaaaacaac
ctgatcactccagcgctgctacctagggctgctgcacgcgccaagctgactgccaaattg
gccagacgcaaattggcggatctgcgcccgggtcttttgcctgtcattcttctcctcaaa
gacaaccaagcttgcattctgttggagtggctgcccgatggccaggcacgggtcaggttt
gctgaatctggcgaatcagctgatgtattgtccaaagacgagctcgatgcggtctatggc
ggcatcgtcttttttgtccgcccggtgttcaattttgaccagcgcgcgccagataccggg
cacatcaaatccagacactggttttggggcgtcgtgttccaaaactggcgcttgtaccgc
gacagtttgctggccgcggctttgatcaacctgtttgcgctggccttgccgttatttacc
atgacggtttatgacagggtcgttccgaaccgtgcgcaagagacactgtgggttctggcg
atcggcgttgtattgatgctgttctttgatacggcgctgcgcacggtcagggcttacgtg
ctggacacggctggcaagaggattgacgtcaccctatcggccaagatcatgggtaaagtt
ttaggcatgaaaatggccgatcggcctgtatctgtggggtcttttgctgcaaatttaaga
gcatttgaggcggtgagagattttgtggcctcggcttccatcaccaccttggtagatatc
ccctttgtttttgtgttcttttttgtactcgcctggatatccccttggctgatattgccg
cccctgatcagcatcattttgttgttgatctccggcttgttggtgcaacaaaaaatgcag
gaattggtggatgtcacccaacgggcagcatcgcagcgcaacgccacgttggtagaaagt
ctggtgggaattgaaaccatcaaagtcatggtggccgaaagcagctttcagaggaagtgg
gagcactcgactatttttctggcgcaaaagggcagcaaactcaaatttttgtcagcggcc
gtcatgaactttgcgcagaccttgcagcagtttgtcacggtcgctgtattggtggtcggg
gtgtatctgctgattgacaaacaggtcagcatgggcggcatcatcgcggcgtccatgttg
gctggtcgggcgatggcaccgtttggccaggtcgctggactgttaatgcagtttcatcat
gctaaaaatggcttggcatccattgaaggtcacatgaaaaccccgtctgagcggggcggt
gacgccgcgtttttgcaccgaacacggtttcaagggcagatcgagttcaagaacgtaagt
tttacttatcccgggcagcagcagggtgccttgaacaaagtgtcattcaagatccaagcg
ggggaaaaggtggctttgattgggcgcgtggggtctggtaagtcgacgatccaaaagctg
atactgggcttgcaccagccgaccgagggcgccatttctatcgacggcatcgacatgcgc
caaatcgatccggcagagctgcgccgggcagctggctacgtgtcgcaggacgtcagtctt
ttctatggctcattgaaggaaaacattgccttgggtgcgccattcgcggacgaccaagac
atcattgatgcggctgagatcgctggcgttgcggagttcgccaatcgacacccgcagggg
tatgacatggccatcggcgagcgcggcgagtctttgtcagggggccagcgacaagcggtg
ggtattgctcgcgcggttttgaatgattcgcctattttgcttttagacgagccaagcagc
gccatggatcatcaaagcgaagatgccttgaaaaccagattgcggcgtttttccgctggg
aaaacagttgttttggtgacccaccgaaacgtattgcttgagatggtcgaccggctgatc
gtgatcgacaacggtcaaatcatggctgacggccccaaggcacaagtggttgaggcgctg
caaagtggccgcatcgggaaggccgcatga
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