Rhodoferax antarcticus: RA876_12935
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Entry
RA876_12935 CDS
T04655
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rac
Rhodoferax antarcticus
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rac03016
]
RA876_12935
Enzymes [BR:
rac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RA876_12935
Transfer RNA biogenesis [BR:
rac03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RA876_12935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
APW47115
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All DBs
Position
2702528..2704012
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AA seq
494 aa
AA seq
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MKPTAQTAHPHTRADLVHIATQAMIERGLEPEFSNQVKQQLESISGLGHESGPDIRDLTQ
LLWCSIDNDDSLDLDQLTACEALPKGAVRLWVAIADVDALVRKGSAIDRHAHINTTSVYT
SARIFPMLPERLSTDLTSLNEGQDRLALVTEMVFDADGALSGSTVYRAVVRNQAKLAYDA
VSAWIEGAGELPAPAAKVKGMDAQLHTQDDLAQRLRVRRRTAGALEFETFQPRAVFDGEQ
VVDIRQQLQNRGRQLIEEVMIATNGCTARYLSHHGGASLRRVVRSPERWLRIVAVAKEYG
EALPTEPDAKALEAFLARRRRADPLRFPDLSLVIVKLMGRGEYVAEIPGAEPIGHFGLAV
QDYTHSTAPNRRYPDLITSRLLKAALAHQPHPYSNAELGQLAEHCTRQEDAAQKVERRMR
KSDAALLLESRLGEFFDAVVTGATLQGIWVRVFTPPAEGKLVSNGANLGVGDKVRVKLIA
ANVERGFIDFELAG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaactgcccaaaccgcccatccccatacccgtgccgatctggttcacattgcc
acccaggccatgattgagcgcgggctggaacccgagttctcaaaccaggtcaagcagcag
cttgagtcgatcagcgggctcggccatgagagcggccccgacatccgtgacctgacccaa
ctgctgtggtgctcaatcgacaacgatgactcgctcgacctggaccagttgacggcatgc
gaggcgctgcccaagggggcggtgcggctgtgggtggccattgctgatgtcgatgcgctg
gtgcgcaagggctcggctatcgatcgacatgcccacatcaacaccacctcggtctatacc
tcagcgcgcatttttccgatgctgcctgagcgcctgtcgaccgacctgacctcgctcaat
gagggtcaggatcgccttgcgctggtcacggaaatggtgttcgatgccgatggcgcactc
agtggctccacggtctaccgtgccgtggttcgcaatcaggccaagttggcctacgacgcc
gttagcgcctggatcgagggcgcaggcgagttgcctgcgcccgctgccaaggtcaagggc
atggatgcccaactgcacacccaggatgatctggcgcaacgtctgcgcgtgcgccgccga
accgcgggcgcactggagtttgagaccttccagccgcgggccgtgttcgatggcgaacag
gtggtcgacattcgccagcagctgcaaaaccgcggccgccagttgattgaagaagtgatg
attgcgaccaacggctgcaccgcgcgctatctgagccatcacgggggtgcctcgctgcgg
cgtgtggtgcgttcgcctgagcgctggctgcgcatcgtggcggtagcaaaggagtacggt
gaagcgctccctactgaaccagatgccaaggcactggaagcctttttggcacggcgccgg
cgtgccgacccgctgcgctttcccgatctgtcgctagtcatcgtcaagctcatgggccgg
ggcgaatacgtggcggagatcccaggcgccgagccgatcggccacttcggtctggcggtg
caggattacacccattcgacggcaccgaaccggcgctatcccgacctaattacctcgcgc
ctgctgaaggcggcgctggcgcaccagccccacccctacagcaatgctgaactagggcaa
ctcgccgagcactgcacccggcaggaagacgcagcgcaaaaagtcgaacgacgcatgcgc
aagtctgacgcggcgctgctgctggaatcccgcttgggagagttctttgatgcggtcgtc
acgggggccacccttcagggcatttgggtgcgcgttttcacgccccccgccgaaggcaaa
ctggtctcaaacggggcaaacctgggggtcggagacaaagtacgcgtaaaactcatcgcc
gccaacgtggagcgcggcttcattgactttgagctggcgggctga
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