Rhodoferax antarcticus: RA876_13015
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Entry
RA876_13015 CDS
T04655
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
rac
Rhodoferax antarcticus
Pathway
rac02020
Two-component system
rac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA876_13015
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA876_13015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rac02022
]
RA876_13015
Two-component system [BR:
rac02022
]
OmpR family
QseC-QseB (quorum sensing)
RA876_13015
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Gene cluster
GFIT
Motif
Pfam:
Trans_reg_C
Response_reg
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
APW47126
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All DBs
Position
complement(2715946..2716629)
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AA seq
227 aa
AA seq
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MRLLILEDDAQLADALGTGLRQLGHVVDCFPDGVRADAALGTAHYDALVLDLGLPGADGM
VWLRRWRERGVALPVLILTARDGLEQRIAGLDAGADDYLIKPVAINELAARLRALLRRAT
GRSQSEWLHGGLRYDPSTRQVHWQGQPVELTARETALLEILLKHPQRVLSKTQLLEQMYD
WSGDEPESNALEVHIHHLRRKLHPTLVRTIRGLGYALGPALGAQEAT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttactgattctcgaagacgatgcccaactcgccgatgcccttggtacgggtttg
cggcaacttggtcacgtggtggactgttttcccgacggtgtgcgggcagatgccgccctt
ggcacggcccactacgacgccttggtccttgaccttggtctgcccggcgccgatggcatg
gtctggctcaggcgctggcgagagcgtggtgtggccttgccggtgctgattctgaccgca
cgcgatggtcttgagcaacgcatcgccgggctggatgcaggggctgatgactacttgatc
aagcctgtggcgatcaacgaactggcggcgcgcctgcgtgccttgctgcgccgcgccacg
gggcgcagtcaatccgagtggttgcatggcggcttgcgttacgacccgtcgacccggcag
gtgcactggcaaggccagcccgtggagctgaccgcacgtgaaacggctttgctggagatc
ctgctcaaacatccgcagcgggtgttgtccaaaacccagctgctggagcagatgtacgac
tggagcggtgatgagccagaaagcaacgcgctggaagtgcatatccaccacctgcgccgc
aagcttcacccgacgctggtgcgcaccattcgtgggcttgggtacgcgttgggcccggcc
ctgggtgcgcaggaggccacatga
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