Rhodoferax antarcticus: RA876_13225
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Entry
RA876_13225 CDS
T04655
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rac
Rhodoferax antarcticus
Pathway
rac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RA876_13225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rac03400
]
RA876_13225
DNA repair and recombination proteins [BR:
rac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RA876_13225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
Motif
Other DBs
NCBI-ProteinID:
APW47161
LinkDB
All DBs
Position
2762426..2765050
Genome browser
AA seq
874 aa
AA seq
DB search
MTDTATPHTPMMTQYLGLKADYPQTLLLYRMGDFYELFYADAEKAARLLNITLTQRGQSA
GQPVVMAGVPFHSVETYLARLIKLGESVAICEQVGDVATAKGPVERKVVRVVTPGTLTDL
ELLSDKTEALLLAVHQGPRQACGLAWLSVTQGVVHLAECAADELANWVLRISPGELIFSA
GATPAFEARLRAIPTTTALSISVRPDWQFDAGLGQRTLTQHLQAASLAPWQAQDLVQAQA
AAAALLSYTEHTQGRVLTHIHSVQVQREGDLIDLPPTTRRNLELVQTLRGEDSPTLFSLL
DTCQTGMGSRLLKSWLLTPRRDRSEAMQRHRAIEALRSGPTLSAGAGPWDKLRQQLKGST
DVQRITARIALRQVRPRELVGLQVTLQKTELLAPVIHGLEAYLTHISQNLLPPAGCAELL
RSAIDAEPATLVRDGGVIASGFDAELDELRAIQTNCDGFLLDLETRERTRTGITNLRVQF
NKVHGFFIEVTQGQANKVPDDYRRRQTLKNAERFITPELKAFEDKALSAQERALAREKWL
YEQLLDQLQAHVPALTRLANALATLDALCALAERSLTLDWCAPQFAREPCIDIEAGRHPV
VQARLAELSSGAFIANDTRLSVKQRMQIITGPNMGGKSTYMRQIAVMVLLASIGSYVPAA
SCRLGPIDAIHTRIGAADDLANAQSTFMLEMLEAAQILNAATPNSLVLMDEIGRGTSTFD
GLALASAIATQLHDKTQAYTLFATHYFELTEFAATHHAAINVHVSAAESGRDIVFLHEIQ
PGPASKSYGIQVARLAGMPAAVVNRARHTLEALEAQASQHQAQVDLFAAPVATEVIAYNA
IEVWARALNPDELSPREALEALYQLKKLVVSQVG
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgccacgccgcacacccccatgatgacccagtacctgggcctgaaggcg
gactacccccagacactgctgctctaccgcatgggggacttttacgagctgttttacgcc
gacgccgaaaaagccgcacgcctgctcaacatcacactcacccaacgcggccaaagcgcc
ggacagccggtggtgatggccggcgtgccgtttcactcggtcgaaacctatctagcgcgc
ctgatcaagctgggcgaatcggtggccatctgcgaacaggtcggcgatgtagccacggcc
aaaggcccggtcgagcgcaaagtggtgcgggtcgtgacccccggcacgttgaccgatctg
gagctgctcagcgacaaaaccgaggcgcttttgctcgccgtacaccaaggcccgcgccaa
gcctgcggcctggcctggctaagcgtgacccaaggcgtggtgcatctggctgaatgtgcc
gccgacgaactggccaactgggtgctgcgcatcagcccgggcgagctgatcttcagcgcc
ggggcgacaccggcttttgaggctaggctgcgcgccattccgaccactacagcgctgtcg
atctcggtgcgacccgactggcagtttgacgcgggcctgggccagcgcaccctcacccaa
cacctgcaagcggccagcttggccccctggcaggcgcaagatctggtgcaagcgcaggcc
gcagccgcagcgctattgagctacaccgaacacacccagggccgcgtgctcacccacatc
cacagtgtgcaagtgcagcgcgagggtgacctgatcgacctgccgcccaccacccggcgc
aatctggaactggtgcaaaccctgcgcggtgaggattcgcccacgctgttttcgctgctc
gacacctgccagaccggcatgggcagccgcttgctcaaaagctggttgctgacaccccgg
cgtgaccgcagcgaggccatgcaacgccaccgcgcgattgaggcgctgcgcagcggcccc
acattgtcagcaggcgctggcccgtgggacaagctgcgccagcagctcaaaggcagcacc
gatgtgcagcgcatcaccgcgcgtattgcgctgcgccaagtgcgaccgcgtgagctggtg
ggactgcaagtcacactacaaaaaacagagctactcgcgcccgtaatacatgggctagag
gcctatttgacacatatttctcagaatctgttgccgcccgctggctgcgcagaattactg
cgctccgctatcgacgctgagcccgccacgctggtgcgcgacggtggtgtgattgcctcg
ggctttgatgccgagctggacgaactgcgtgccatccagaccaactgcgacggctttttg
ctggacctggaaacccgcgagcgaacccgcaccggcatcaccaacctgcgggtgcagttc
aacaaagtccacggctttttcattgaagtcacccagggccaggccaacaaagtacccgac
gattaccgccgccgccagaccctgaaaaatgccgagcgcttcatcacccccgaactcaaa
gcctttgaagacaaagccctcagcgcgcaggaacgtgccttggcgcgtgaaaaatggctg
tatgagcagctgctggaccagttgcaggcgcatgtaccggcgctcacccgcctcgctaac
gcgctggccacgctggacgccttgtgcgcgctggccgagcgcagcctcaccctggactgg
tgcgcgccgcagtttgcccgcgagccatgcatcgacatcgaggcgggccgccacccggtg
gtgcaagcccggttggctgaactcagctcgggtgccttcattgccaacgacacgaggttg
agcgtcaagcagcgcatgcagatcatcaccggccccaacatgggtggtaaatctacctac
atgcgccagattgcggtgatggtgctgctggcgagcatcggcagttatgtgcctgccgcc
agctgccgcctcgggccgatcgacgccatccacacccgcattggcgcagccgacgacctg
gccaacgcccagtccaccttcatgctggaaatgttggaggccgcgcaaatactgaacgca
gccacacccaactcgctggtgctgatggacgaaattggccgtggcaccagcacctttgac
ggtttggcgctggccagtgccattgccacgcagctgcacgacaaaacccaggcctacacc
ctgtttgccacgcactactttgagctgaccgagtttgcggccacgcatcacgccgccatc
aatgtgcatgtgagtgccgctgaaagtggccgcgacatcgtctttttgcacgagatccag
cctggccccgccagcaaaagctacggcattcaggtggcgcggctggccggcatgcccgcc
gcagtggtcaaccgcgcccgccacacgctggaagcgctggaggcgcaagccagccagcat
caggcccaggtggatttgtttgcggcaccagtcgctacagaagtcatagcttacaacgca
atagaggtatgggctagagccctaaatcctgatgaactgagcccgcgtgaggcgctggag
gcgctgtaccaactcaagaagctggtggtcagccaagtcggctga
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