KEGG   Rhodoferax antarcticus: RA876_15355
Entry
RA876_15355       CDS       T04655                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rac  Rhodoferax antarcticus
Brite
KEGG Orthology (KO) [BR:rac00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rac02048]
    RA876_15355
Enzymes [BR:rac01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RA876_15355
Prokaryotic defense system [BR:rac02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RA876_15355
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII
Other DBs
NCBI-ProteinID: APW47505
LinkDB
Position
complement(3168468..3171830)
AA seq 1120 aa
MTEDQLEQEALAWLADVGYTHAYGPDIAHDGPHPERTSYRQVLLLQRLREAINRLNPTIP
TAAREDAFKQVMDLGMPALMSANQHFHRLLVTGVPVQYQKDGETRGDFVRLIDWATPERN
EWLAVNQFSIRGPHHTRRPDIILFVNGLPLVLIELKNPADEKADVWKAYDQIQTYKEQIP
DVFQTNELLVISDGTEALLGSLSANPERFMAWRTIDGVTLDPLGEFNELQTLVRGVLAPA
YLLDYLRYFVLFEDDGGIVKKIAGYHQFHAVRLAIGRVIDASRPGSLPGIRGKGGVVWHT
QGSGKSITMTCFAARVMQEPLMENPTIVVITDRNDLDGQLFGVFSLAQDLLREQPVQART
RTELRTLLANRPSGGIVFATIQKFMPGEDEDMFPVLSSRHNIVVMADEAHRTQYGFEAKL
KTRKSGNTASAPDSSLRGAQRRGNPAPSVANVNAFGFTLITPVALVSIAQAATTTIATGA
GATPAHQVEFVPPTYAVDGVVESYPVESYQVGYAQHLRDALPHATFVAFTGTPVSSTDRD
TRAVFGDYIHVYDMQQAQEDGATVAIYYESRLAKLRLKDADLPLLDDEVDELSEDEEDSF
QAKLKSRWAALEKVVGAEPRVASVAADLVAHFEERNKAQTGKAMVVAMSRDICVHLYTEI
IKLRPNWHDADPEQGAIKIVMTGSASDKALLRPHIYSAQTKKRLEKRFKDPADPLRLVIV
RDMWLTGFDAPCVHTLYVDKPMKGHNLMQAIARVNRVFKDKQGGLVVDYIGIGSELKAAM
KEYTNSKGRGRPTVDAFEAFSLMQEKLDILRAMLCRFDYSGFLTGGHKTLAGAANHVLGL
KSANGWDGKKRFCDVALAMSKAFTLCCTLDEAKVVREEVAFLQGVKVILTKKEATATRRT
DEQRELAIRQIISQAVVSDSVVDIFDAVGLDKPNIGLLDDEFLAQVRDLPEKNLAVELLE
RLLEGEIKSRFASNVVQNRKFSEMLASVIARYQNRSIETAQVMEELIEMAKKFREAASRG
ETLGLSEDEVRFYDALAANESAVRELTDDTLKKIAHELTENLRQNLSVDWSERTSVRAKL
RLMVKRILRKYKYKYPPDLQDAAVELVLQQAQALGENWAG
NT seq 3363 nt   +upstreamnt  +downstreamnt
atgaccgaagaccagctcgaacaagaagccctggcctggctggccgatgtgggctacacc
cacgcttatggccctgacatcgcccacgacggcccccaccctgagcgaaccagctaccgc
caggtgctgttgctgcagcgtttgcgcgaggccatcaaccgcctgaaccccaccattccc
accgctgcccgtgaagatgcgttcaagcaggtgatggatttgggcatgccggccctcatg
agcgccaaccagcactttcaccgcctgctggtcaccggcgtgccggtgcagtaccaaaaa
gacggcgagacacgcggtgactttgtgcggctgatcgactgggccacaccggagcgcaac
gagtggctggcggttaaccagttttcaatccgtggcccgcaccacacccgccgcccggac
atcatcctgttcgttaacggcctgccgctggtgctgatcgagctgaagaacccggctgat
gagaaggccgatgtgtggaaggcctacgaccagattcagacctacaaagagcagattcct
gacgtgttccagaccaacgagctgctggtgatctctgacggcaccgaggccctgctgggc
agcctgagcgccaaccccgagcgcttcatggcctggcgcacgattgacggcgttacgctg
gacccattgggcgaattcaacgagttgcaaacgctggtgcgcggtgtgctggccccagcc
tatctgctggactacctgcgctactttgtgctgtttgaggacgatggcggtattgtcaaa
aagattgccggctaccaccagtttcatgcggtgcgcctggccattgggcgcgtcatcgac
gcatcacgtcccggcagcctgcccggcattcggggcaaaggcggcgtggtctggcacacc
cagggcagcggcaaaagcatcaccatgacctgctttgcggctcgcgtgatgcaggagccg
ctgatggaaaacccaaccattgtcgtgatcaccgaccgtaacgacctggacggccagctg
tttggcgtgttcagcctggcgcaagacctgttgcgcgagcagccggtgcaggcccgcacc
cgcacagagctgcgcacgctgctggcgaaccggccttcgggcggcatagtgtttgccacc
attcagaagttcatgcctggtgaggacgaagacatgttcccggtgctctcaagccgccac
aacatcgtggtgatggctgatgaggcgcaccgcacgcaatatggctttgaggccaagcta
aaaacccgtaagagcggcaacaccgcaagcgcaccagactcgtcattgcgaggagcgcag
cgacgcggcaatccagccccatcggtcgccaacgtcaacgccttcggttttacgttaatt
acgcccgtagccctcgtatccattgcgcaagcagctacaactaccatagcaaccggcgca
ggtgccaccccagcacatcaggtggagttcgtgccgccgacctatgccgtggacggggtt
gtggaaagttacccggtcgaaagctatcaagtgggttatgcccaacacctgcgcgatgcc
ctaccgcacgccacctttgtcgccttcaccggcacaccagtcagcagcaccgaccgcgac
acccgcgccgtttttggtgactacatccacgtgtacgacatgcagcaggcgcaggaagac
ggtgccacggtggcgatctattatgagagtcgtctggccaaactgcgcctgaaagacgcc
gacctgccgctgctcgacgacgaggtcgatgagctgagtgaggacgaagaagacagcttt
caagccaagctcaaaagccgctgggccgcactggagaaagtggtaggtgccgagccccgc
gtggccagcgtggcggccgacctggtagcccactttgaggaacgcaacaaagcccagacc
ggcaaagccatggtcgtggccatgagccgtgacatttgcgtgcatctgtacaccgagatc
atcaaactgcgccccaactggcatgacgccgaccccgagcagggtgccatcaagatcgtc
atgactggcagtgccagcgacaaggcgctgttgcgcccgcacatctacagcgcccagacc
aagaaacggctggaaaagcgcttcaaagaccctgccgacccgctgcgcctggtcatcgtg
cgcgacatgtggctcaccggcttcgatgcgccctgcgtgcacaccctgtacgtggacaag
cccatgaagggccacaacctgatgcaggccattgcccgcgtcaaccgcgtgttcaaggac
aagcagggcggcctggtggtggactacatcggcattggcagtgagttgaaagcggccatg
aaggagtacaccaacagcaagggccgaggccgcccgacggtggatgcctttgaggctttc
agtttgatgcaggagaagctggacattctgcgcgccatgttgtgccgctttgactactcg
ggctttctgactggcggccacaaaacattagccggtgccgccaatcatgtgctgggtctg
aaatctgccaatggttgggacggcaaaaagcgcttctgtgatgtggcgctggccatgagc
aaggcatttaccttgtgctgcacgctggacgaggccaaggtggtgcgcgaagaagtcgcg
tttctgcaaggtgtgaaagtcatcctgaccaagaaagaagccaccgccacccgccgcacc
gacgagcagcgcgagctggccattcggcagatcatcagccaggcggtggtgtccgacagc
gtggtcgatatttttgatgccgtggggctggataaacccaacatcggtttgctggacgac
gagtttctggcccaggtgcgtgacctgcccgagaagaacctggcggtggagctgctggag
cgcctgctggagggcgaaatcaaaagccgctttgccagcaacgtggtgcaaaaccgcaag
ttctccgagatgctggccagtgtgattgcgcgataccaaaaccgcagcatcgaaaccgcg
caggtcatggaagagctgatcgagatggccaaaaagttccgcgaagcggcctcacgtggt
gaaacattgggtttgagcgaagacgaagtgcgtttctacgatgccctggccgccaacgaa
tcagcggtgcgcgaactgaccgacgacaccctgaaaaaaattgcccatgagctgactgag
aacctgcgccaaaacctgagcgtggactggtcagaacggaccagcgtgcgcgccaagctg
cggctgatggtcaagcgcatcctgcgcaaatacaaatacaaataccctcctgatttgcag
gacgcagcggtggagctggtgttgcagcaggcgcaggcgttgggggagaactgggcgggg
tga

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